Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PHGDHO43175 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.08■□□□□ 0.32
PHGDHO43175 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PHGDHO43175 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.08■□□□□ 0.32
PHGDHO43175 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PHGDHO43175 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PHGDHO43175 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PHGDHO43175 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PHGDHO43175 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.08■□□□□ 0.32
PHGDHO43175 DRAXINP1-201ENST00000437611 948 ntBASIC17.08■□□□□ 0.32
PHGDHO43175 LINC00265-3P-201ENST00000447588 903 ntBASIC17.08■□□□□ 0.32
PHGDHO43175 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.08■□□□□ 0.32
PHGDHO43175 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.08■□□□□ 0.32
PHGDHO43175 AC087388.1-201ENST00000571370 1112 ntBASIC17.08■□□□□ 0.32
PHGDHO43175 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PHGDHO43175 Z69720.1-201ENST00000601483 472 ntBASIC17.08■□□□□ 0.32
PHGDHO43175 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
PHGDHO43175 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PHGDHO43175 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PHGDHO43175 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PHGDHO43175 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
PHGDHO43175 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.08■□□□□ 0.32
PHGDHO43175 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PHGDHO43175 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PHGDHO43175 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PHGDHO43175 INTS4P1-201ENST00000438455 1935 ntBASIC17.08■□□□□ 0.32
PHGDHO43175 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
PHGDHO43175 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHGDHO43175 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHGDHO43175 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PHGDHO43175 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
PHGDHO43175 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHGDHO43175 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.07■□□□□ 0.32
PHGDHO43175 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PHGDHO43175 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.07■□□□□ 0.32
PHGDHO43175 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.07■□□□□ 0.32
PHGDHO43175 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
PHGDHO43175 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHGDHO43175 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHGDHO43175 IER3-202ENST00000376377 1350 ntBASIC17.07■□□□□ 0.32
PHGDHO43175 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHGDHO43175 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHGDHO43175 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PHGDHO43175 RCN1P2-201ENST00000398357 915 ntBASIC17.07■□□□□ 0.32
PHGDHO43175 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.07■□□□□ 0.32
PHGDHO43175 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PHGDHO43175 KRT17P6-201ENST00000453795 1220 ntBASIC17.07■□□□□ 0.32
PHGDHO43175 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PHGDHO43175 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.07■□□□□ 0.32
PHGDHO43175 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHGDHO43175 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PHGDHO43175 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHGDHO43175 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHGDHO43175 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.07■□□□□ 0.32
PHGDHO43175 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
PHGDHO43175 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHGDHO43175 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHGDHO43175 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
PHGDHO43175 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHGDHO43175 AC148477.5-201ENST00000625164 1645 ntBASIC17.07■□□□□ 0.32
PHGDHO43175 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.06■□□□□ 0.32
PHGDHO43175 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHGDHO43175 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHGDHO43175 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.06■□□□□ 0.32
PHGDHO43175 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
PHGDHO43175 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHGDHO43175 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.06■□□□□ 0.32
PHGDHO43175 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.06■□□□□ 0.32
PHGDHO43175 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHGDHO43175 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
PHGDHO43175 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHGDHO43175 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.06■□□□□ 0.32
PHGDHO43175 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.06■□□□□ 0.32
PHGDHO43175 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHGDHO43175 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHGDHO43175 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.06■□□□□ 0.32
PHGDHO43175 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHGDHO43175 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHGDHO43175 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PHGDHO43175 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHGDHO43175 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.06■□□□□ 0.32
PHGDHO43175 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.06■□□□□ 0.32
PHGDHO43175 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PHGDHO43175 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PHGDHO43175 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PHGDHO43175 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PHGDHO43175 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHGDHO43175 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PHGDHO43175 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
PHGDHO43175 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.06■□□□□ 0.32
PHGDHO43175 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PHGDHO43175 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHGDHO43175 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.06■□□□□ 0.32
PHGDHO43175 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PHGDHO43175 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHGDHO43175 GPR89P-201ENST00000407924 1495 ntBASIC17.05■□□□□ 0.32
PHGDHO43175 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PHGDHO43175 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHGDHO43175 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PHGDHO43175 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms