Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH17O14917 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDH17O14917 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH17O14917 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH17O14917 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.4■□□□□ 0.22
PCDH17O14917 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDH17O14917 AC105339.3-201ENST00000560043 636 ntBASIC16.4■□□□□ 0.22
PCDH17O14917 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.4■□□□□ 0.22
PCDH17O14917 STK25P1-201ENST00000585406 838 ntBASIC16.4■□□□□ 0.22
PCDH17O14917 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
PCDH17O14917 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.4■□□□□ 0.22
PCDH17O14917 MIR7706-201ENST00000613747 67 ntBASIC16.4■□□□□ 0.22
PCDH17O14917 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
PCDH17O14917 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH17O14917 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH17O14917 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH17O14917 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH17O14917 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDH17O14917 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH17O14917 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PCDH17O14917 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH17O14917 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDH17O14917 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH17O14917 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH17O14917 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PCDH17O14917 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.22
PCDH17O14917 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
PCDH17O14917 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDH17O14917 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDH17O14917 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PCDH17O14917 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDH17O14917 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDH17O14917 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDH17O14917 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDH17O14917 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDH17O14917 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDH17O14917 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDH17O14917 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
PCDH17O14917 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDH17O14917 RPS2P1-201ENST00000434010 821 ntBASIC16.39■□□□□ 0.21
PCDH17O14917 HNRNPDP1-201ENST00000439535 754 ntBASIC16.39■□□□□ 0.21
PCDH17O14917 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDH17O14917 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDH17O14917 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.39■□□□□ 0.21
PCDH17O14917 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDH17O14917 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDH17O14917 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.39■□□□□ 0.21
PCDH17O14917 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDH17O14917 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDH17O14917 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDH17O14917 LINC01451-201ENST00000623792 534 ntBASIC16.39■□□□□ 0.21
PCDH17O14917 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDH17O14917 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.39■□□□□ 0.21
PCDH17O14917 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PCDH17O14917 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDH17O14917 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDH17O14917 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
PCDH17O14917 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PCDH17O14917 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDH17O14917 ZNF259P1-201ENST00000407656 1365 ntBASIC16.38■□□□□ 0.21
PCDH17O14917 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH17O14917 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH17O14917 NCF1C-201ENST00000438382 1427 ntBASIC16.38■□□□□ 0.21
PCDH17O14917 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH17O14917 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH17O14917 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH17O14917 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDH17O14917 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PCDH17O14917 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH17O14917 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDH17O14917 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDH17O14917 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDH17O14917 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDH17O14917 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.38■□□□□ 0.21
PCDH17O14917 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDH17O14917 SLC25A1P1-201ENST00000528351 927 ntBASIC16.38■□□□□ 0.21
PCDH17O14917 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDH17O14917 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDH17O14917 AC145285.3-201ENST00000564603 959 ntBASIC16.38■□□□□ 0.21
PCDH17O14917 AC109462.3-201ENST00000573934 613 ntBASIC16.38■□□□□ 0.21
PCDH17O14917 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDH17O14917 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDH17O14917 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDH17O14917 MIR1199-201ENST00000621445 119 ntBASIC16.38■□□□□ 0.21
PCDH17O14917 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDH17O14917 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDH17O14917 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PCDH17O14917 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH17O14917 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH17O14917 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PCDH17O14917 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH17O14917 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDH17O14917 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDH17O14917 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH17O14917 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDH17O14917 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH17O14917 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PCDH17O14917 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
PCDH17O14917 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH17O14917 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms