Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
AP3B1O00203 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.33■□□□□ 0.36
AP3B1O00203 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
AP3B1O00203 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
AP3B1O00203 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP3B1O00203 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP3B1O00203 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
AP3B1O00203 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP3B1O00203 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
AP3B1O00203 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.33■□□□□ 0.36
AP3B1O00203 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP3B1O00203 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.33■□□□□ 0.36
AP3B1O00203 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.33■□□□□ 0.36
AP3B1O00203 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.33■□□□□ 0.36
AP3B1O00203 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
AP3B1O00203 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP3B1O00203 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.33■□□□□ 0.36
AP3B1O00203 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
AP3B1O00203 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.33■□□□□ 0.36
AP3B1O00203 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
AP3B1O00203 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP3B1O00203 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP3B1O00203 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP3B1O00203 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.33■□□□□ 0.36
AP3B1O00203 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
AP3B1O00203 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP3B1O00203 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
AP3B1O00203 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
AP3B1O00203 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP3B1O00203 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP3B1O00203 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP3B1O00203 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP3B1O00203 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP3B1O00203 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.33■□□□□ 0.36
AP3B1O00203 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.33■□□□□ 0.36
AP3B1O00203 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3B1O00203 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3B1O00203 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3B1O00203 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.32■□□□□ 0.36
AP3B1O00203 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3B1O00203 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
AP3B1O00203 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3B1O00203 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3B1O00203 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3B1O00203 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AP3B1O00203 AGGF1P2-201ENST00000426656 2106 ntBASIC17.32■□□□□ 0.36
AP3B1O00203 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3B1O00203 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
AP3B1O00203 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.32■□□□□ 0.36
AP3B1O00203 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3B1O00203 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3B1O00203 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3B1O00203 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.32■□□□□ 0.36
AP3B1O00203 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.32■□□□□ 0.36
AP3B1O00203 RBM17P3-201ENST00000417687 1192 ntBASIC17.32■□□□□ 0.36
AP3B1O00203 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.32■□□□□ 0.36
AP3B1O00203 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.32■□□□□ 0.36
AP3B1O00203 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.32■□□□□ 0.36
AP3B1O00203 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
AP3B1O00203 AL139384.1-201ENST00000612143 3047 ntBASIC17.32■□□□□ 0.36
AP3B1O00203 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3B1O00203 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3B1O00203 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
AP3B1O00203 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
AP3B1O00203 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AP3B1O00203 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3B1O00203 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3B1O00203 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3B1O00203 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3B1O00203 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
AP3B1O00203 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3B1O00203 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3B1O00203 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3B1O00203 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
AP3B1O00203 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3B1O00203 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.31■□□□□ 0.36
AP3B1O00203 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3B1O00203 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
AP3B1O00203 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
AP3B1O00203 LINC00982-205ENST00000420957 435 ntBASIC17.31■□□□□ 0.36
AP3B1O00203 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
AP3B1O00203 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3B1O00203 AC106795.1-205ENST00000512851 1056 ntBASIC17.31■□□□□ 0.36
AP3B1O00203 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.31■□□□□ 0.36
AP3B1O00203 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3B1O00203 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.31■□□□□ 0.36
AP3B1O00203 AL445228.2-201ENST00000605589 952 ntBASIC17.31■□□□□ 0.36
AP3B1O00203 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
AP3B1O00203 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.31■□□□□ 0.36
AP3B1O00203 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.31■□□□□ 0.36
AP3B1O00203 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3B1O00203 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3B1O00203 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3B1O00203 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
AP3B1O00203 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.31■□□□□ 0.36
AP3B1O00203 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3B1O00203 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
AP3B1O00203 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3B1O00203 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
AP3B1O00203 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms