Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV5A0A0B4J249 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.37□□□□□ -0.27
TRAV5A0A0B4J249 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAV5A0A0B4J249 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAV5A0A0B4J249 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV5A0A0B4J249 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV5A0A0B4J249 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV5A0A0B4J249 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV5A0A0B4J249 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV5A0A0B4J249 STX3-203ENST00000529177 1571 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAV5A0A0B4J249 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV5A0A0B4J249 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV5A0A0B4J249 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV5A0A0B4J249 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV5A0A0B4J249 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TRAV5A0A0B4J249 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV5A0A0B4J249 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.37□□□□□ -0.27
TRAV5A0A0B4J249 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV5A0A0B4J249 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV5A0A0B4J249 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
TRAV5A0A0B4J249 MYCLP1-201ENST00000372451 1075 ntBASIC13.37□□□□□ -0.27
TRAV5A0A0B4J249 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV5A0A0B4J249 SAPCD2P2-201ENST00000431719 1174 ntBASIC13.37□□□□□ -0.27
TRAV5A0A0B4J249 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC13.37□□□□□ -0.27
TRAV5A0A0B4J249 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV5A0A0B4J249 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAV5A0A0B4J249 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC13.37□□□□□ -0.27
TRAV5A0A0B4J249 GPR32P1-201ENST00000601788 811 ntBASIC13.37□□□□□ -0.27
TRAV5A0A0B4J249 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV5A0A0B4J249 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC13.37□□□□□ -0.27
TRAV5A0A0B4J249 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAV5A0A0B4J249 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV5A0A0B4J249 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
TRAV5A0A0B4J249 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV5A0A0B4J249 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV5A0A0B4J249 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAV5A0A0B4J249 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV5A0A0B4J249 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TRAV5A0A0B4J249 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV5A0A0B4J249 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV5A0A0B4J249 BANP-204ENST00000393208 2283 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAV5A0A0B4J249 AC097374.2-201ENST00000618617 1306 ntBASIC13.37□□□□□ -0.27
TRAV5A0A0B4J249 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 COPE-203ENST00000351079 907 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 ANKRD20A18P-201ENST00000359341 492 ntBASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 COX11P1-201ENST00000489116 835 ntBASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 AC124947.2-201ENST00000547118 1133 ntBASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 DUT-205ENST00000558813 769 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms