Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 RPSAP43-201ENST00000402237 625 ntBASIC16.57■□□□□ 0.24
PCDHGA6Q9Y5G7 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHGA6Q9Y5G7 GPX1P2-201ENST00000429271 606 ntBASIC16.57■□□□□ 0.24
PCDHGA6Q9Y5G7 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHGA6Q9Y5G7 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA6Q9Y5G7 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
PCDHGA6Q9Y5G7 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.57■□□□□ 0.24
PCDHGA6Q9Y5G7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHGA6Q9Y5G7 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHGA6Q9Y5G7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
PCDHGA6Q9Y5G7 AL589182.2-201ENST00000619332 1049 ntBASIC16.57■□□□□ 0.24
PCDHGA6Q9Y5G7 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA6Q9Y5G7 AC005593.1-201ENST00000624894 515 ntBASIC16.57■□□□□ 0.24
PCDHGA6Q9Y5G7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHGA6Q9Y5G7 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA6Q9Y5G7 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PCDHGA6Q9Y5G7 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA6Q9Y5G7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
PCDHGA6Q9Y5G7 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA6Q9Y5G7 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA6Q9Y5G7 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHGA6Q9Y5G7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHGA6Q9Y5G7 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PCDHGA6Q9Y5G7 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA6Q9Y5G7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA6Q9Y5G7 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA6Q9Y5G7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA6Q9Y5G7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDHGA6Q9Y5G7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA6Q9Y5G7 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
PCDHGA6Q9Y5G7 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA6Q9Y5G7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHGA6Q9Y5G7 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA6Q9Y5G7 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA6Q9Y5G7 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
PCDHGA6Q9Y5G7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA6Q9Y5G7 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHGA6Q9Y5G7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.56■□□□□ 0.24
PCDHGA6Q9Y5G7 AL118508.1-201ENST00000613502 2345 ntBASIC16.56■□□□□ 0.24
PCDHGA6Q9Y5G7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA6Q9Y5G7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA6Q9Y5G7 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA6Q9Y5G7 YBX2P1-201ENST00000394192 760 ntBASIC16.56■□□□□ 0.24
PCDHGA6Q9Y5G7 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.56■□□□□ 0.24
PCDHGA6Q9Y5G7 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHGA6Q9Y5G7 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PCDHGA6Q9Y5G7 AC004832.2-201ENST00000426397 482 ntBASIC16.56■□□□□ 0.24
PCDHGA6Q9Y5G7 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.56■□□□□ 0.24
PCDHGA6Q9Y5G7 AC136632.2-201ENST00000512891 861 ntBASIC16.56■□□□□ 0.24
PCDHGA6Q9Y5G7 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.56■□□□□ 0.24
PCDHGA6Q9Y5G7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.56■□□□□ 0.24
PCDHGA6Q9Y5G7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.56■□□□□ 0.24
PCDHGA6Q9Y5G7 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
PCDHGA6Q9Y5G7 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.56■□□□□ 0.24
PCDHGA6Q9Y5G7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDHGA6Q9Y5G7 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
PCDHGA6Q9Y5G7 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA6Q9Y5G7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA6Q9Y5G7 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHGA6Q9Y5G7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
PCDHGA6Q9Y5G7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA6Q9Y5G7 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PCDHGA6Q9Y5G7 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA6Q9Y5G7 AL138688.1-201ENST00000624851 1594 ntBASIC16.55■□□□□ 0.24
PCDHGA6Q9Y5G7 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
PCDHGA6Q9Y5G7 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
PCDHGA6Q9Y5G7 AL353593.2-201ENST00000602529 1483 ntBASIC16.55■□□□□ 0.24
PCDHGA6Q9Y5G7 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA6Q9Y5G7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA6Q9Y5G7 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA6Q9Y5G7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA6Q9Y5G7 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA6Q9Y5G7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGA6Q9Y5G7 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PCDHGA6Q9Y5G7 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA6Q9Y5G7 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA6Q9Y5G7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA6Q9Y5G7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA6Q9Y5G7 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGA6Q9Y5G7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA6Q9Y5G7 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PCDHGA6Q9Y5G7 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PCDHGA6Q9Y5G7 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGA6Q9Y5G7 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA6Q9Y5G7 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA6Q9Y5G7 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGA6Q9Y5G7 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.55■□□□□ 0.24
PCDHGA6Q9Y5G7 AL691403.2-201ENST00000618460 490 ntBASIC16.55■□□□□ 0.24
PCDHGA6Q9Y5G7 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.55■□□□□ 0.24
PCDHGA6Q9Y5G7 AC073592.5-201ENST00000624854 528 ntBASIC16.55■□□□□ 0.24
PCDHGA6Q9Y5G7 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PCDHGA6Q9Y5G7 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA6Q9Y5G7 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA6Q9Y5G7 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA6Q9Y5G7 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA6Q9Y5G7 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PCDHGA6Q9Y5G7 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PCDHGA6Q9Y5G7 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA6Q9Y5G7 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA6Q9Y5G7 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms