Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PKP3Q9Y446 SLC25A1P3-201ENST00000395415 828 ntBASIC17.24■□□□□ 0.35
PKP3Q9Y446 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.24■□□□□ 0.35
PKP3Q9Y446 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.24■□□□□ 0.35
PKP3Q9Y446 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.24■□□□□ 0.35
PKP3Q9Y446 FAM197Y8-203ENST00000450145 560 ntBASIC17.24■□□□□ 0.35
PKP3Q9Y446 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.24■□□□□ 0.35
PKP3Q9Y446 RNPS1P1-201ENST00000507437 918 ntBASIC17.24■□□□□ 0.35
PKP3Q9Y446 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PKP3Q9Y446 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.24■□□□□ 0.35
PKP3Q9Y446 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.24■□□□□ 0.35
PKP3Q9Y446 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PKP3Q9Y446 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PKP3Q9Y446 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PKP3Q9Y446 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PKP3Q9Y446 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.24■□□□□ 0.35
PKP3Q9Y446 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PKP3Q9Y446 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PKP3Q9Y446 AP001094.4-201ENST00000579008 2176 ntBASIC17.23■□□□□ 0.35
PKP3Q9Y446 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PKP3Q9Y446 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PKP3Q9Y446 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PKP3Q9Y446 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PKP3Q9Y446 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.23■□□□□ 0.35
PKP3Q9Y446 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PKP3Q9Y446 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PKP3Q9Y446 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.23■□□□□ 0.35
PKP3Q9Y446 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PKP3Q9Y446 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.23■□□□□ 0.35
PKP3Q9Y446 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.23■□□□□ 0.35
PKP3Q9Y446 AC025062.2-201ENST00000605477 670 ntBASIC17.23■□□□□ 0.35
PKP3Q9Y446 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PKP3Q9Y446 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PKP3Q9Y446 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.23■□□□□ 0.35
PKP3Q9Y446 GPR89P-201ENST00000407924 1495 ntBASIC17.23■□□□□ 0.35
PKP3Q9Y446 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PKP3Q9Y446 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PKP3Q9Y446 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PKP3Q9Y446 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PKP3Q9Y446 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PKP3Q9Y446 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PKP3Q9Y446 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PKP3Q9Y446 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.22■□□□□ 0.35
PKP3Q9Y446 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PKP3Q9Y446 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PKP3Q9Y446 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PKP3Q9Y446 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PKP3Q9Y446 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PKP3Q9Y446 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
PKP3Q9Y446 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PKP3Q9Y446 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PKP3Q9Y446 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PKP3Q9Y446 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PKP3Q9Y446 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PKP3Q9Y446 RPS2P28-201ENST00000314255 741 ntBASIC17.22■□□□□ 0.35
PKP3Q9Y446 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
PKP3Q9Y446 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
PKP3Q9Y446 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.22■□□□□ 0.35
PKP3Q9Y446 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PKP3Q9Y446 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PKP3Q9Y446 LAGE3P1-201ENST00000425356 484 ntBASIC17.22■□□□□ 0.35
PKP3Q9Y446 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PKP3Q9Y446 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.22■□□□□ 0.35
PKP3Q9Y446 AC079781.3-201ENST00000449110 356 ntBASIC17.22■□□□□ 0.35
PKP3Q9Y446 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PKP3Q9Y446 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PKP3Q9Y446 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.22■□□□□ 0.35
PKP3Q9Y446 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.22■□□□□ 0.35
PKP3Q9Y446 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.22■□□□□ 0.35
PKP3Q9Y446 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.22■□□□□ 0.35
PKP3Q9Y446 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.22■□□□□ 0.35
PKP3Q9Y446 AL353135.1-201ENST00000606729 504 ntBASIC17.22■□□□□ 0.35
PKP3Q9Y446 AL139424.1-201ENST00000607572 797 ntBASIC17.22■□□□□ 0.35
PKP3Q9Y446 AL031008.1-201ENST00000619963 541 ntBASIC17.22■□□□□ 0.35
PKP3Q9Y446 TP73-AS1-207ENST00000624167 988 ntBASIC17.22■□□□□ 0.35
PKP3Q9Y446 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
PKP3Q9Y446 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PKP3Q9Y446 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
PKP3Q9Y446 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PKP3Q9Y446 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PKP3Q9Y446 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PKP3Q9Y446 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
PKP3Q9Y446 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PKP3Q9Y446 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PKP3Q9Y446 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PKP3Q9Y446 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PKP3Q9Y446 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.22■□□□□ 0.35
PKP3Q9Y446 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PKP3Q9Y446 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PKP3Q9Y446 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.21■□□□□ 0.35
PKP3Q9Y446 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.21■□□□□ 0.35
PKP3Q9Y446 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PKP3Q9Y446 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PKP3Q9Y446 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.21■□□□□ 0.35
PKP3Q9Y446 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.21■□□□□ 0.35
PKP3Q9Y446 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PKP3Q9Y446 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PKP3Q9Y446 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PKP3Q9Y446 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PKP3Q9Y446 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms