Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
RPH3AQ9Y2J0 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPH3AQ9Y2J0 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.78■□□□□ 0.12
RPH3AQ9Y2J0 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.78■□□□□ 0.12
RPH3AQ9Y2J0 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPH3AQ9Y2J0 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.78■□□□□ 0.12
RPH3AQ9Y2J0 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.78■□□□□ 0.12
RPH3AQ9Y2J0 AC092865.5-201ENST00000545435 363 ntBASIC15.78■□□□□ 0.12
RPH3AQ9Y2J0 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.78■□□□□ 0.12
RPH3AQ9Y2J0 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.78■□□□□ 0.12
RPH3AQ9Y2J0 LINC02084-201ENST00000606069 1096 ntBASIC15.78■□□□□ 0.12
RPH3AQ9Y2J0 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.78■□□□□ 0.12
RPH3AQ9Y2J0 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.78■□□□□ 0.12
RPH3AQ9Y2J0 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
RPH3AQ9Y2J0 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPH3AQ9Y2J0 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.78■□□□□ 0.12
RPH3AQ9Y2J0 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPH3AQ9Y2J0 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.78■□□□□ 0.12
RPH3AQ9Y2J0 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPH3AQ9Y2J0 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RPH3AQ9Y2J0 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
RPH3AQ9Y2J0 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.78■□□□□ 0.12
RPH3AQ9Y2J0 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPH3AQ9Y2J0 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPH3AQ9Y2J0 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.78■□□□□ 0.12
RPH3AQ9Y2J0 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.78■□□□□ 0.12
RPH3AQ9Y2J0 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
RPH3AQ9Y2J0 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RPH3AQ9Y2J0 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RPH3AQ9Y2J0 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
RPH3AQ9Y2J0 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RPH3AQ9Y2J0 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RPH3AQ9Y2J0 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
RPH3AQ9Y2J0 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RPH3AQ9Y2J0 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.77■□□□□ 0.12
RPH3AQ9Y2J0 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.77■□□□□ 0.12
RPH3AQ9Y2J0 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RPH3AQ9Y2J0 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RPH3AQ9Y2J0 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
RPH3AQ9Y2J0 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RPH3AQ9Y2J0 AC097637.2-201ENST00000624096 1997 ntBASIC15.77■□□□□ 0.12
RPH3AQ9Y2J0 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
RPH3AQ9Y2J0 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RPH3AQ9Y2J0 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RPH3AQ9Y2J0 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RPH3AQ9Y2J0 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
RPH3AQ9Y2J0 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RPH3AQ9Y2J0 RPS2P28-201ENST00000314255 741 ntBASIC15.77■□□□□ 0.12
RPH3AQ9Y2J0 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RPH3AQ9Y2J0 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.77■□□□□ 0.12
RPH3AQ9Y2J0 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.77■□□□□ 0.12
RPH3AQ9Y2J0 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RPH3AQ9Y2J0 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
RPH3AQ9Y2J0 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.77■□□□□ 0.12
RPH3AQ9Y2J0 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.77■□□□□ 0.12
RPH3AQ9Y2J0 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RPH3AQ9Y2J0 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.77■□□□□ 0.12
RPH3AQ9Y2J0 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.77■□□□□ 0.12
RPH3AQ9Y2J0 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.77■□□□□ 0.12
RPH3AQ9Y2J0 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
RPH3AQ9Y2J0 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RPH3AQ9Y2J0 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RPH3AQ9Y2J0 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
RPH3AQ9Y2J0 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.77■□□□□ 0.12
RPH3AQ9Y2J0 FAM215A-202ENST00000632077 792 ntBASIC15.77■□□□□ 0.12
RPH3AQ9Y2J0 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RPH3AQ9Y2J0 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
RPH3AQ9Y2J0 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.77■□□□□ 0.11
RPH3AQ9Y2J0 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
RPH3AQ9Y2J0 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.77■□□□□ 0.11
RPH3AQ9Y2J0 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
RPH3AQ9Y2J0 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
RPH3AQ9Y2J0 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
RPH3AQ9Y2J0 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RPH3AQ9Y2J0 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
RPH3AQ9Y2J0 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
RPH3AQ9Y2J0 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
RPH3AQ9Y2J0 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
RPH3AQ9Y2J0 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPH3AQ9Y2J0 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.76■□□□□ 0.11
RPH3AQ9Y2J0 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPH3AQ9Y2J0 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPH3AQ9Y2J0 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
RPH3AQ9Y2J0 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RPH3AQ9Y2J0 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPH3AQ9Y2J0 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPH3AQ9Y2J0 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RPH3AQ9Y2J0 IL9RP2-201ENST00000423948 1312 ntBASIC15.76■□□□□ 0.11
RPH3AQ9Y2J0 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.76■□□□□ 0.11
RPH3AQ9Y2J0 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
RPH3AQ9Y2J0 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.76■□□□□ 0.11
RPH3AQ9Y2J0 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPH3AQ9Y2J0 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPH3AQ9Y2J0 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.76■□□□□ 0.11
RPH3AQ9Y2J0 HMGN1P19-201ENST00000436976 333 ntBASIC15.76■□□□□ 0.11
RPH3AQ9Y2J0 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.76■□□□□ 0.11
RPH3AQ9Y2J0 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
RPH3AQ9Y2J0 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.76■□□□□ 0.11
RPH3AQ9Y2J0 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPH3AQ9Y2J0 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms