Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPASTQ9UBP0 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SPASTQ9UBP0 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SPASTQ9UBP0 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SPASTQ9UBP0 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.12■□□□□ 0.33
SPASTQ9UBP0 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPASTQ9UBP0 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SPASTQ9UBP0 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 AC009336.1-201ENST00000608941 1553 ntBASIC17.11■□□□□ 0.33
SPASTQ9UBP0 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 GPX1P2-201ENST00000429271 606 ntBASIC17.11■□□□□ 0.33
SPASTQ9UBP0 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 RPS15P9-201ENST00000494093 319 ntBASIC17.11■□□□□ 0.33
SPASTQ9UBP0 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 AL691403.2-201ENST00000618460 490 ntBASIC17.11■□□□□ 0.33
SPASTQ9UBP0 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.11■□□□□ 0.33
SPASTQ9UBP0 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPASTQ9UBP0 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.1■□□□□ 0.33
SPASTQ9UBP0 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.1■□□□□ 0.33
SPASTQ9UBP0 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPASTQ9UBP0 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SPASTQ9UBP0 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPASTQ9UBP0 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPASTQ9UBP0 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPASTQ9UBP0 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SPASTQ9UBP0 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPASTQ9UBP0 RPSAP43-201ENST00000402237 625 ntBASIC17.1■□□□□ 0.33
SPASTQ9UBP0 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SPASTQ9UBP0 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.1■□□□□ 0.33
SPASTQ9UBP0 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.1■□□□□ 0.33
SPASTQ9UBP0 MIR4751-201ENST00000578027 74 ntBASIC17.1■□□□□ 0.33
SPASTQ9UBP0 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.1■□□□□ 0.33
SPASTQ9UBP0 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.1■□□□□ 0.33
SPASTQ9UBP0 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SPASTQ9UBP0 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.1■□□□□ 0.33
SPASTQ9UBP0 AC008667.4-201ENST00000607370 168 ntBASIC17.1■□□□□ 0.33
SPASTQ9UBP0 AC012313.1-201ENST00000593393 3059 ntBASIC17.1■□□□□ 0.33
SPASTQ9UBP0 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPASTQ9UBP0 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SPASTQ9UBP0 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SPASTQ9UBP0 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.1■□□□□ 0.33
SPASTQ9UBP0 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SPASTQ9UBP0 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SPASTQ9UBP0 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.1■□□□□ 0.33
SPASTQ9UBP0 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPASTQ9UBP0 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
SPASTQ9UBP0 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPASTQ9UBP0 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
SPASTQ9UBP0 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SPASTQ9UBP0 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.09■□□□□ 0.33
SPASTQ9UBP0 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPASTQ9UBP0 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SPASTQ9UBP0 NFIC-211ENST00000641145 8399 ntBASIC17.09■□□□□ 0.33
SPASTQ9UBP0 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SPASTQ9UBP0 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPASTQ9UBP0 AC023274.1-201ENST00000418278 595 ntBASIC17.09■□□□□ 0.33
SPASTQ9UBP0 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.09■□□□□ 0.33
SPASTQ9UBP0 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.09■□□□□ 0.33
SPASTQ9UBP0 IGHV3-65-201ENST00000523210 341 ntBASIC17.09■□□□□ 0.33
SPASTQ9UBP0 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SPASTQ9UBP0 MTDHP5-201ENST00000598980 586 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms