Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC24.28■■□□□ 1.48
SLC52A1Q9NWF4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
SLC52A1Q9NWF4 SLC9A3P2-201ENST00000447821 2021 ntBASIC24.28■■□□□ 1.48
SLC52A1Q9NWF4 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC24.28■■□□□ 1.48
SLC52A1Q9NWF4 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC24.28■■□□□ 1.48
SLC52A1Q9NWF4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
SLC52A1Q9NWF4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SLC52A1Q9NWF4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
SLC52A1Q9NWF4 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SLC52A1Q9NWF4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SLC52A1Q9NWF4 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
SLC52A1Q9NWF4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SLC52A1Q9NWF4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC24.27■■□□□ 1.48
SLC52A1Q9NWF4 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SLC52A1Q9NWF4 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SLC52A1Q9NWF4 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SLC52A1Q9NWF4 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC24.27■■□□□ 1.48
SLC52A1Q9NWF4 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC24.27■■□□□ 1.48
SLC52A1Q9NWF4 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC24.27■■□□□ 1.48
SLC52A1Q9NWF4 CYP2A7P1-201ENST00000595391 815 ntBASIC24.27■■□□□ 1.48
SLC52A1Q9NWF4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SLC52A1Q9NWF4 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC24.27■■□□□ 1.48
SLC52A1Q9NWF4 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SLC52A1Q9NWF4 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC24.27■■□□□ 1.48
SLC52A1Q9NWF4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
SLC52A1Q9NWF4 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
SLC52A1Q9NWF4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SLC52A1Q9NWF4 KRT8P49-201ENST00000604166 1432 ntBASIC24.27■■□□□ 1.48
SLC52A1Q9NWF4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC24.26■■□□□ 1.47
SLC52A1Q9NWF4 FOXO1B-201ENST00000504678 1527 ntBASIC24.26■■□□□ 1.47
SLC52A1Q9NWF4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC24.26■■□□□ 1.47
SLC52A1Q9NWF4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SLC52A1Q9NWF4 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SLC52A1Q9NWF4 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC24.26■■□□□ 1.47
SLC52A1Q9NWF4 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SLC52A1Q9NWF4 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SLC52A1Q9NWF4 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SLC52A1Q9NWF4 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC24.26■■□□□ 1.47
SLC52A1Q9NWF4 REEP4-207ENST00000523293 913 ntTSL 3 BASIC24.26■■□□□ 1.47
SLC52A1Q9NWF4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC24.26■■□□□ 1.47
SLC52A1Q9NWF4 AC004233.3-201ENST00000607794 1269 ntBASIC24.26■■□□□ 1.47
SLC52A1Q9NWF4 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC24.26■■□□□ 1.47
SLC52A1Q9NWF4 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC24.26■■□□□ 1.47
SLC52A1Q9NWF4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC24.26■■□□□ 1.47
SLC52A1Q9NWF4 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SLC52A1Q9NWF4 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
SLC52A1Q9NWF4 AC104581.1-202ENST00000635932 2618 ntBASIC24.26■■□□□ 1.47
SLC52A1Q9NWF4 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SLC52A1Q9NWF4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SLC52A1Q9NWF4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
SLC52A1Q9NWF4 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC24.25■■□□□ 1.47
SLC52A1Q9NWF4 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
SLC52A1Q9NWF4 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
SLC52A1Q9NWF4 LINC00896-202ENST00000609602 2128 ntBASIC24.25■■□□□ 1.47
SLC52A1Q9NWF4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SLC52A1Q9NWF4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC24.25■■□□□ 1.47
SLC52A1Q9NWF4 AC012317.2-201ENST00000623305 2251 ntBASIC24.25■■□□□ 1.47
SLC52A1Q9NWF4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC24.25■■□□□ 1.47
SLC52A1Q9NWF4 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SLC52A1Q9NWF4 HNRNPA3P1-201ENST00000401429 1139 ntBASIC24.25■■□□□ 1.47
SLC52A1Q9NWF4 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC24.25■■□□□ 1.47
SLC52A1Q9NWF4 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC24.25■■□□□ 1.47
SLC52A1Q9NWF4 HNRNPA3P5-201ENST00000455201 833 ntBASIC24.25■■□□□ 1.47
SLC52A1Q9NWF4 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC24.25■■□□□ 1.47
SLC52A1Q9NWF4 NOP2-220ENST00000545915 630 ntTSL 2 BASIC24.25■■□□□ 1.47
SLC52A1Q9NWF4 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC24.25■■□□□ 1.47
SLC52A1Q9NWF4 AL359881.2-201ENST00000602973 570 ntBASIC24.25■■□□□ 1.47
SLC52A1Q9NWF4 AC003101.2-201ENST00000612557 442 ntBASIC24.25■■□□□ 1.47
SLC52A1Q9NWF4 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SLC52A1Q9NWF4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC24.25■■□□□ 1.47
SLC52A1Q9NWF4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC24.25■■□□□ 1.47
SLC52A1Q9NWF4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
SLC52A1Q9NWF4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
SLC52A1Q9NWF4 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SLC52A1Q9NWF4 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SLC52A1Q9NWF4 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SLC52A1Q9NWF4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
SLC52A1Q9NWF4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SLC52A1Q9NWF4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SLC52A1Q9NWF4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
SLC52A1Q9NWF4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SLC52A1Q9NWF4 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SLC52A1Q9NWF4 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SLC52A1Q9NWF4 PP14571-201ENST00000404327 934 ntTSL 2 BASIC24.24■■□□□ 1.47
SLC52A1Q9NWF4 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC24.24■■□□□ 1.47
SLC52A1Q9NWF4 STARD13-205ENST00000439831 945 ntTSL 2 BASIC24.24■■□□□ 1.47
SLC52A1Q9NWF4 KRT18P34-201ENST00000488218 1270 ntBASIC24.24■■□□□ 1.47
SLC52A1Q9NWF4 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC24.24■■□□□ 1.47
SLC52A1Q9NWF4 AL008721.1-201ENST00000609964 604 ntBASIC24.24■■□□□ 1.47
SLC52A1Q9NWF4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SLC52A1Q9NWF4 AL035456.1-201ENST00000456064 1369 ntBASIC24.24■■□□□ 1.47
SLC52A1Q9NWF4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC24.24■■□□□ 1.47
SLC52A1Q9NWF4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
SLC52A1Q9NWF4 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
SLC52A1Q9NWF4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SLC52A1Q9NWF4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC24.24■■□□□ 1.47
SLC52A1Q9NWF4 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
SLC52A1Q9NWF4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
SLC52A1Q9NWF4 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC24.23■■□□□ 1.47
SLC52A1Q9NWF4 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC24.23■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms