Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
FBXO28Q9NVF7 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FBXO28Q9NVF7 AC012569.1-201ENST00000591191 1524 ntBASIC19.61■□□□□ 0.73
FBXO28Q9NVF7 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.61■□□□□ 0.73
FBXO28Q9NVF7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
FBXO28Q9NVF7 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FBXO28Q9NVF7 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FBXO28Q9NVF7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.61■□□□□ 0.73
FBXO28Q9NVF7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
FBXO28Q9NVF7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FBXO28Q9NVF7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.61■□□□□ 0.73
FBXO28Q9NVF7 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.61■□□□□ 0.73
FBXO28Q9NVF7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
FBXO28Q9NVF7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.61■□□□□ 0.73
FBXO28Q9NVF7 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FBXO28Q9NVF7 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FBXO28Q9NVF7 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FBXO28Q9NVF7 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.61■□□□□ 0.73
FBXO28Q9NVF7 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.61■□□□□ 0.73
FBXO28Q9NVF7 AC079140.1-201ENST00000508039 487 ntBASIC19.61■□□□□ 0.73
FBXO28Q9NVF7 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
FBXO28Q9NVF7 LINC00628-201ENST00000628516 1289 ntBASIC19.61■□□□□ 0.73
FBXO28Q9NVF7 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FBXO28Q9NVF7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FBXO28Q9NVF7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FBXO28Q9NVF7 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.61■□□□□ 0.73
FBXO28Q9NVF7 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
FBXO28Q9NVF7 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.61■□□□□ 0.73
FBXO28Q9NVF7 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FBXO28Q9NVF7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
FBXO28Q9NVF7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
FBXO28Q9NVF7 AC067852.2-201ENST00000590513 2313 ntBASIC19.6■□□□□ 0.73
FBXO28Q9NVF7 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FBXO28Q9NVF7 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FBXO28Q9NVF7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.6■□□□□ 0.73
FBXO28Q9NVF7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.6■□□□□ 0.73
FBXO28Q9NVF7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
FBXO28Q9NVF7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FBXO28Q9NVF7 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FBXO28Q9NVF7 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.6■□□□□ 0.73
FBXO28Q9NVF7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FBXO28Q9NVF7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FBXO28Q9NVF7 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FBXO28Q9NVF7 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FBXO28Q9NVF7 TFAMP1-201ENST00000412727 736 ntBASIC19.6■□□□□ 0.73
FBXO28Q9NVF7 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
FBXO28Q9NVF7 SPDYE11-202ENST00000450699 704 ntBASIC19.6■□□□□ 0.73
FBXO28Q9NVF7 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.6■□□□□ 0.73
FBXO28Q9NVF7 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.6■□□□□ 0.73
FBXO28Q9NVF7 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.6■□□□□ 0.73
FBXO28Q9NVF7 SPDYE9P-201ENST00000570642 692 ntBASIC19.6■□□□□ 0.73
FBXO28Q9NVF7 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.6■□□□□ 0.73
FBXO28Q9NVF7 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.6■□□□□ 0.73
FBXO28Q9NVF7 SPDYE10P-202ENST00000612005 668 ntBASIC19.6■□□□□ 0.73
FBXO28Q9NVF7 SPDYE8P-202ENST00000612377 668 ntBASIC19.6■□□□□ 0.73
FBXO28Q9NVF7 AC093512.1-201ENST00000617969 520 ntBASIC19.6■□□□□ 0.73
FBXO28Q9NVF7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
FBXO28Q9NVF7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.6■□□□□ 0.73
FBXO28Q9NVF7 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
FBXO28Q9NVF7 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
FBXO28Q9NVF7 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FBXO28Q9NVF7 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
FBXO28Q9NVF7 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
FBXO28Q9NVF7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FBXO28Q9NVF7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FBXO28Q9NVF7 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FBXO28Q9NVF7 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
FBXO28Q9NVF7 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.59■□□□□ 0.73
FBXO28Q9NVF7 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
FBXO28Q9NVF7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
FBXO28Q9NVF7 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
FBXO28Q9NVF7 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FBXO28Q9NVF7 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
FBXO28Q9NVF7 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.59■□□□□ 0.73
FBXO28Q9NVF7 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
FBXO28Q9NVF7 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
FBXO28Q9NVF7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.59■□□□□ 0.73
FBXO28Q9NVF7 FAM58DP-201ENST00000428076 619 ntBASIC19.59■□□□□ 0.73
FBXO28Q9NVF7 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.59■□□□□ 0.73
FBXO28Q9NVF7 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.59■□□□□ 0.73
FBXO28Q9NVF7 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.59■□□□□ 0.73
FBXO28Q9NVF7 AL135744.1-201ENST00000565098 629 ntBASIC19.59■□□□□ 0.73
FBXO28Q9NVF7 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.59■□□□□ 0.73
FBXO28Q9NVF7 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
FBXO28Q9NVF7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
FBXO28Q9NVF7 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
FBXO28Q9NVF7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FBXO28Q9NVF7 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.59■□□□□ 0.73
FBXO28Q9NVF7 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
FBXO28Q9NVF7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
FBXO28Q9NVF7 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FBXO28Q9NVF7 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
FBXO28Q9NVF7 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.59■□□□□ 0.73
FBXO28Q9NVF7 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.58■□□□□ 0.73
FBXO28Q9NVF7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
FBXO28Q9NVF7 AL133373.2-201ENST00000623187 2828 ntBASIC19.58■□□□□ 0.73
FBXO28Q9NVF7 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
FBXO28Q9NVF7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
FBXO28Q9NVF7 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.58■□□□□ 0.73
FBXO28Q9NVF7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms