Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HPS4Q9NQG7 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.76■□□□□ 0.43
HPS4Q9NQG7 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HPS4Q9NQG7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.76■□□□□ 0.43
HPS4Q9NQG7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.76■□□□□ 0.43
HPS4Q9NQG7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
HPS4Q9NQG7 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HPS4Q9NQG7 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.75■□□□□ 0.43
HPS4Q9NQG7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
HPS4Q9NQG7 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.75■□□□□ 0.43
HPS4Q9NQG7 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
HPS4Q9NQG7 AC046185.3-201ENST00000623228 1824 ntBASIC17.75■□□□□ 0.43
HPS4Q9NQG7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.75■□□□□ 0.43
HPS4Q9NQG7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HPS4Q9NQG7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HPS4Q9NQG7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HPS4Q9NQG7 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
HPS4Q9NQG7 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HPS4Q9NQG7 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HPS4Q9NQG7 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.75■□□□□ 0.43
HPS4Q9NQG7 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.75■□□□□ 0.43
HPS4Q9NQG7 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
HPS4Q9NQG7 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.75■□□□□ 0.43
HPS4Q9NQG7 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HPS4Q9NQG7 AP002472.1-201ENST00000577490 586 ntBASIC17.75■□□□□ 0.43
HPS4Q9NQG7 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.75■□□□□ 0.43
HPS4Q9NQG7 AC091812.2-201ENST00000619081 385 ntBASIC17.75■□□□□ 0.43
HPS4Q9NQG7 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
HPS4Q9NQG7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HPS4Q9NQG7 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.75■□□□□ 0.43
HPS4Q9NQG7 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.75■□□□□ 0.43
HPS4Q9NQG7 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HPS4Q9NQG7 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.75■□□□□ 0.43
HPS4Q9NQG7 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HPS4Q9NQG7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.75■□□□□ 0.43
HPS4Q9NQG7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
HPS4Q9NQG7 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
HPS4Q9NQG7 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HPS4Q9NQG7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HPS4Q9NQG7 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HPS4Q9NQG7 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
HPS4Q9NQG7 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.74■□□□□ 0.43
HPS4Q9NQG7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HPS4Q9NQG7 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HPS4Q9NQG7 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.74■□□□□ 0.43
HPS4Q9NQG7 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
HPS4Q9NQG7 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HPS4Q9NQG7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HPS4Q9NQG7 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HPS4Q9NQG7 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HPS4Q9NQG7 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HPS4Q9NQG7 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HPS4Q9NQG7 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.74■□□□□ 0.43
HPS4Q9NQG7 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.74■□□□□ 0.43
HPS4Q9NQG7 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HPS4Q9NQG7 LINC02084-201ENST00000606069 1096 ntBASIC17.74■□□□□ 0.43
HPS4Q9NQG7 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.74■□□□□ 0.43
HPS4Q9NQG7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.74■□□□□ 0.43
HPS4Q9NQG7 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.74■□□□□ 0.43
HPS4Q9NQG7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HPS4Q9NQG7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HPS4Q9NQG7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HPS4Q9NQG7 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
HPS4Q9NQG7 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HPS4Q9NQG7 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HPS4Q9NQG7 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
HPS4Q9NQG7 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HPS4Q9NQG7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.73■□□□□ 0.43
HPS4Q9NQG7 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HPS4Q9NQG7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HPS4Q9NQG7 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
HPS4Q9NQG7 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HPS4Q9NQG7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HPS4Q9NQG7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
HPS4Q9NQG7 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
HPS4Q9NQG7 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HPS4Q9NQG7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.73■□□□□ 0.43
HPS4Q9NQG7 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HPS4Q9NQG7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HPS4Q9NQG7 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HPS4Q9NQG7 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HPS4Q9NQG7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.73■□□□□ 0.43
HPS4Q9NQG7 FAM185BP-201ENST00000443595 716 ntBASIC17.73■□□□□ 0.43
HPS4Q9NQG7 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
HPS4Q9NQG7 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.73■□□□□ 0.43
HPS4Q9NQG7 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.73■□□□□ 0.43
HPS4Q9NQG7 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.73■□□□□ 0.43
HPS4Q9NQG7 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.73■□□□□ 0.43
HPS4Q9NQG7 AC092902.6-201ENST00000641783 218 ntBASIC17.73■□□□□ 0.43
HPS4Q9NQG7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HPS4Q9NQG7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HPS4Q9NQG7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.73■□□□□ 0.43
HPS4Q9NQG7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HPS4Q9NQG7 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.73■□□□□ 0.43
HPS4Q9NQG7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.73■□□□□ 0.43
HPS4Q9NQG7 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HPS4Q9NQG7 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HPS4Q9NQG7 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HPS4Q9NQG7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HPS4Q9NQG7 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms