Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
CNTNAP4Q9C0A0 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC21.36■■□□□ 1.01
CNTNAP4Q9C0A0 NME9-203ENST00000383180 2133 ntTSL 2 BASIC21.36■■□□□ 1.01
CNTNAP4Q9C0A0 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CNTNAP4Q9C0A0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CNTNAP4Q9C0A0 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CNTNAP4Q9C0A0 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CNTNAP4Q9C0A0 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CNTNAP4Q9C0A0 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC21.35■■□□□ 1.01
CNTNAP4Q9C0A0 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC21.35■■□□□ 1.01
CNTNAP4Q9C0A0 CDK2AP2P3-201ENST00000422476 372 ntBASIC21.35■■□□□ 1.01
CNTNAP4Q9C0A0 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC21.35■■□□□ 1.01
CNTNAP4Q9C0A0 MIR4492-201ENST00000581627 80 ntBASIC21.35■■□□□ 1.01
CNTNAP4Q9C0A0 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC21.35■■□□□ 1.01
CNTNAP4Q9C0A0 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC21.35■■□□□ 1.01
CNTNAP4Q9C0A0 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC21.35■■□□□ 1.01
CNTNAP4Q9C0A0 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CNTNAP4Q9C0A0 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CNTNAP4Q9C0A0 SLC9A3P2-201ENST00000447821 2021 ntBASIC21.35■■□□□ 1.01
CNTNAP4Q9C0A0 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CNTNAP4Q9C0A0 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CNTNAP4Q9C0A0 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CNTNAP4Q9C0A0 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CNTNAP4Q9C0A0 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CNTNAP4Q9C0A0 AC120498.9-201ENST00000339021 3867 ntBASIC21.35■■□□□ 1.01
CNTNAP4Q9C0A0 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.35■■□□□ 1.01
CNTNAP4Q9C0A0 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CNTNAP4Q9C0A0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.35■■□□□ 1.01
CNTNAP4Q9C0A0 AL355312.1-201ENST00000407115 2176 ntBASIC21.35■■□□□ 1.01
CNTNAP4Q9C0A0 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CNTNAP4Q9C0A0 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CNTNAP4Q9C0A0 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
CNTNAP4Q9C0A0 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC21.34■■□□□ 1.01
CNTNAP4Q9C0A0 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC21.34■■□□□ 1.01
CNTNAP4Q9C0A0 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CNTNAP4Q9C0A0 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC21.34■■□□□ 1.01
CNTNAP4Q9C0A0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CNTNAP4Q9C0A0 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CNTNAP4Q9C0A0 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC21.34■■□□□ 1.01
CNTNAP4Q9C0A0 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CNTNAP4Q9C0A0 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC21.34■■□□□ 1.01
CNTNAP4Q9C0A0 PP14571-201ENST00000404327 934 ntTSL 2 BASIC21.34■■□□□ 1.01
CNTNAP4Q9C0A0 STARD13-205ENST00000439831 945 ntTSL 2 BASIC21.34■■□□□ 1.01
CNTNAP4Q9C0A0 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC21.34■■□□□ 1.01
CNTNAP4Q9C0A0 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC21.34■■□□□ 1.01
CNTNAP4Q9C0A0 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
CNTNAP4Q9C0A0 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CNTNAP4Q9C0A0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CNTNAP4Q9C0A0 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CNTNAP4Q9C0A0 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CNTNAP4Q9C0A0 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC21.34■■□□□ 1.01
CNTNAP4Q9C0A0 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CNTNAP4Q9C0A0 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CNTNAP4Q9C0A0 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CNTNAP4Q9C0A0 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CNTNAP4Q9C0A0 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CNTNAP4Q9C0A0 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CNTNAP4Q9C0A0 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CNTNAP4Q9C0A0 HLA-H-201ENST00000383620 1096 ntBASIC21.33■■□□□ 1.01
CNTNAP4Q9C0A0 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CNTNAP4Q9C0A0 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC21.33■■□□□ 1.01
CNTNAP4Q9C0A0 KRT18P34-201ENST00000488218 1270 ntBASIC21.33■■□□□ 1.01
CNTNAP4Q9C0A0 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC21.33■■□□□ 1.01
CNTNAP4Q9C0A0 AC009407.1-201ENST00000568958 598 ntBASIC21.33■■□□□ 1.01
CNTNAP4Q9C0A0 AL844908.2-201ENST00000609461 460 ntBASIC21.33■■□□□ 1.01
CNTNAP4Q9C0A0 LINC00896-202ENST00000609602 2128 ntBASIC21.33■■□□□ 1.01
CNTNAP4Q9C0A0 MIR6752-201ENST00000618442 71 ntBASIC21.33■■□□□ 1.01
CNTNAP4Q9C0A0 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC21.33■■□□□ 1.01
CNTNAP4Q9C0A0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CNTNAP4Q9C0A0 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CNTNAP4Q9C0A0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CNTNAP4Q9C0A0 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CNTNAP4Q9C0A0 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CNTNAP4Q9C0A0 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC21.33■■□□□ 1
CNTNAP4Q9C0A0 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
CNTNAP4Q9C0A0 KRT8P49-201ENST00000604166 1432 ntBASIC21.33■■□□□ 1
CNTNAP4Q9C0A0 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC21.33■■□□□ 1
CNTNAP4Q9C0A0 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
CNTNAP4Q9C0A0 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CNTNAP4Q9C0A0 AL035456.1-201ENST00000456064 1369 ntBASIC21.33■■□□□ 1
CNTNAP4Q9C0A0 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
CNTNAP4Q9C0A0 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CNTNAP4Q9C0A0 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CNTNAP4Q9C0A0 SLC25A6P5-201ENST00000435663 894 ntBASIC21.32■■□□□ 1
CNTNAP4Q9C0A0 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
CNTNAP4Q9C0A0 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC21.32■■□□□ 1
CNTNAP4Q9C0A0 AC008738.7-201ENST00000609744 511 ntBASIC21.32■■□□□ 1
CNTNAP4Q9C0A0 TEX28P1-201ENST00000613479 1221 ntBASIC21.32■■□□□ 1
CNTNAP4Q9C0A0 TEX28P2-201ENST00000617764 1221 ntBASIC21.32■■□□□ 1
CNTNAP4Q9C0A0 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC21.32■■□□□ 1
CNTNAP4Q9C0A0 RAB34-223ENST00000636154 730 ntTSL 2 BASIC21.32■■□□□ 1
CNTNAP4Q9C0A0 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CNTNAP4Q9C0A0 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC21.32■■□□□ 1
CNTNAP4Q9C0A0 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.32■■□□□ 1
CNTNAP4Q9C0A0 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
CNTNAP4Q9C0A0 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CNTNAP4Q9C0A0 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CNTNAP4Q9C0A0 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CNTNAP4Q9C0A0 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC21.32■■□□□ 1
CNTNAP4Q9C0A0 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms