Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF4Q9BSR8 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF4Q9BSR8 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF4Q9BSR8 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
YIPF4Q9BSR8 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
YIPF4Q9BSR8 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.19■□□□□ 0.18
YIPF4Q9BSR8 AC084018.2-201ENST00000613093 2607 ntBASIC16.19■□□□□ 0.18
YIPF4Q9BSR8 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
YIPF4Q9BSR8 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
YIPF4Q9BSR8 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
YIPF4Q9BSR8 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
YIPF4Q9BSR8 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.19■□□□□ 0.18
YIPF4Q9BSR8 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
YIPF4Q9BSR8 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
YIPF4Q9BSR8 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
YIPF4Q9BSR8 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.19■□□□□ 0.18
YIPF4Q9BSR8 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.19■□□□□ 0.18
YIPF4Q9BSR8 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.19■□□□□ 0.18
YIPF4Q9BSR8 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.19■□□□□ 0.18
YIPF4Q9BSR8 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.19■□□□□ 0.18
YIPF4Q9BSR8 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.19■□□□□ 0.18
YIPF4Q9BSR8 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.19■□□□□ 0.18
YIPF4Q9BSR8 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
YIPF4Q9BSR8 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.19■□□□□ 0.18
YIPF4Q9BSR8 AC106886.4-201ENST00000623557 2502 ntBASIC16.19■□□□□ 0.18
YIPF4Q9BSR8 LINC02012-201ENST00000608206 1725 ntBASIC16.19■□□□□ 0.18
YIPF4Q9BSR8 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.19■□□□□ 0.18
YIPF4Q9BSR8 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
YIPF4Q9BSR8 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
YIPF4Q9BSR8 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
YIPF4Q9BSR8 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 AC003669.1-201ENST00000334569 611 ntBASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 POM121L3P-201ENST00000419331 1163 ntBASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 MIR5100-201ENST00000579544 119 ntBASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 AC005915.1-201ENST00000624912 2018 ntBASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
YIPF4Q9BSR8 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
YIPF4Q9BSR8 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
YIPF4Q9BSR8 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.17■□□□□ 0.18
YIPF4Q9BSR8 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
YIPF4Q9BSR8 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
YIPF4Q9BSR8 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.17■□□□□ 0.18
YIPF4Q9BSR8 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
YIPF4Q9BSR8 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
YIPF4Q9BSR8 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
YIPF4Q9BSR8 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
YIPF4Q9BSR8 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
YIPF4Q9BSR8 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
YIPF4Q9BSR8 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
YIPF4Q9BSR8 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
YIPF4Q9BSR8 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
YIPF4Q9BSR8 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
YIPF4Q9BSR8 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.17■□□□□ 0.18
YIPF4Q9BSR8 FAAHP1-202ENST00000446499 1238 ntBASIC16.17■□□□□ 0.18
YIPF4Q9BSR8 FOSL1P1-201ENST00000511041 816 ntBASIC16.17■□□□□ 0.18
YIPF4Q9BSR8 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.17■□□□□ 0.18
YIPF4Q9BSR8 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
YIPF4Q9BSR8 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.17■□□□□ 0.18
YIPF4Q9BSR8 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.17■□□□□ 0.18
YIPF4Q9BSR8 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms