Protein–RNA interactions for Protein: Q99788

CMKLR1, Chemokine-like receptor 1, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMKLR1Q99788 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CMKLR1Q99788 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CMKLR1Q99788 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CMKLR1Q99788 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CMKLR1Q99788 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CMKLR1Q99788 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CMKLR1Q99788 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CMKLR1Q99788 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CMKLR1Q99788 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.4■□□□□ 0.22
CMKLR1Q99788 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.4■□□□□ 0.22
CMKLR1Q99788 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CMKLR1Q99788 NOC2LP1-202ENST00000452600 2235 ntBASIC16.39■□□□□ 0.22
CMKLR1Q99788 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CMKLR1Q99788 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
CMKLR1Q99788 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.39■□□□□ 0.21
CMKLR1Q99788 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CMKLR1Q99788 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.39■□□□□ 0.21
CMKLR1Q99788 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CMKLR1Q99788 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CMKLR1Q99788 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.39■□□□□ 0.21
CMKLR1Q99788 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CMKLR1Q99788 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CMKLR1Q99788 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.39■□□□□ 0.21
CMKLR1Q99788 AL121761.2-201ENST00000598007 1648 ntBASIC16.39■□□□□ 0.21
CMKLR1Q99788 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CMKLR1Q99788 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CMKLR1Q99788 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CMKLR1Q99788 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
CMKLR1Q99788 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CMKLR1Q99788 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.39■□□□□ 0.21
CMKLR1Q99788 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CMKLR1Q99788 AC002056.1-201ENST00000395613 760 ntBASIC16.39■□□□□ 0.21
CMKLR1Q99788 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CMKLR1Q99788 AC004461.1-201ENST00000412461 403 ntBASIC16.39■□□□□ 0.21
CMKLR1Q99788 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.39■□□□□ 0.21
CMKLR1Q99788 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.39■□□□□ 0.21
CMKLR1Q99788 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CMKLR1Q99788 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.39■□□□□ 0.21
CMKLR1Q99788 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.39■□□□□ 0.21
CMKLR1Q99788 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CMKLR1Q99788 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CMKLR1Q99788 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CMKLR1Q99788 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CMKLR1Q99788 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
CMKLR1Q99788 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CMKLR1Q99788 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CMKLR1Q99788 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.39■□□□□ 0.21
CMKLR1Q99788 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CMKLR1Q99788 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.39■□□□□ 0.21
CMKLR1Q99788 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CMKLR1Q99788 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CMKLR1Q99788 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CMKLR1Q99788 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.38■□□□□ 0.21
CMKLR1Q99788 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CMKLR1Q99788 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.38■□□□□ 0.21
CMKLR1Q99788 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CMKLR1Q99788 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CMKLR1Q99788 PCDHB18P-201ENST00000524813 2368 ntBASIC16.38■□□□□ 0.21
CMKLR1Q99788 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CMKLR1Q99788 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CMKLR1Q99788 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CMKLR1Q99788 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CMKLR1Q99788 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CMKLR1Q99788 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CMKLR1Q99788 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CMKLR1Q99788 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.38■□□□□ 0.21
CMKLR1Q99788 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CMKLR1Q99788 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CMKLR1Q99788 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.38■□□□□ 0.21
CMKLR1Q99788 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.38■□□□□ 0.21
CMKLR1Q99788 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.38■□□□□ 0.21
CMKLR1Q99788 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.38■□□□□ 0.21
CMKLR1Q99788 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.38■□□□□ 0.21
CMKLR1Q99788 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CMKLR1Q99788 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.38■□□□□ 0.21
CMKLR1Q99788 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.38■□□□□ 0.21
CMKLR1Q99788 ACTL9-202ENST00000612068 1252 ntBASIC16.38■□□□□ 0.21
CMKLR1Q99788 AL139327.4-201ENST00000612362 153 ntBASIC16.38■□□□□ 0.21
CMKLR1Q99788 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.38■□□□□ 0.21
CMKLR1Q99788 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CMKLR1Q99788 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.38■□□□□ 0.21
CMKLR1Q99788 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.38■□□□□ 0.21
CMKLR1Q99788 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CMKLR1Q99788 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CMKLR1Q99788 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CMKLR1Q99788 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
CMKLR1Q99788 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.38■□□□□ 0.21
CMKLR1Q99788 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CMKLR1Q99788 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.38■□□□□ 0.21
CMKLR1Q99788 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CMKLR1Q99788 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CMKLR1Q99788 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.38■□□□□ 0.21
CMKLR1Q99788 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.38■□□□□ 0.21
CMKLR1Q99788 AC138028.4-201ENST00000564984 1845 ntBASIC16.38■□□□□ 0.21
CMKLR1Q99788 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CMKLR1Q99788 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CMKLR1Q99788 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.37■□□□□ 0.21
CMKLR1Q99788 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CMKLR1Q99788 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.37■□□□□ 0.21
CMKLR1Q99788 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms