Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 AC133552.6-201ENST00000613406 534 ntBASIC18.41■□□□□ 0.54
ALPK3Q96L96 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ALPK3Q96L96 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
ALPK3Q96L96 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.4■□□□□ 0.54
ALPK3Q96L96 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.4■□□□□ 0.54
ALPK3Q96L96 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ALPK3Q96L96 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ALPK3Q96L96 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ALPK3Q96L96 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ALPK3Q96L96 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC18.4■□□□□ 0.54
ALPK3Q96L96 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.4■□□□□ 0.54
ALPK3Q96L96 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
ALPK3Q96L96 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ALPK3Q96L96 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ALPK3Q96L96 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ALPK3Q96L96 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ALPK3Q96L96 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ALPK3Q96L96 MIR1908-201ENST00000410394 80 ntBASIC18.4■□□□□ 0.54
ALPK3Q96L96 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC18.4■□□□□ 0.54
ALPK3Q96L96 ELK1P1-201ENST00000485699 580 ntBASIC18.4■□□□□ 0.54
ALPK3Q96L96 PARP8-206ENST00000503665 572 ntTSL 4 BASIC18.4■□□□□ 0.54
ALPK3Q96L96 AC104989.1-201ENST00000519711 778 ntBASIC18.4■□□□□ 0.54
ALPK3Q96L96 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ALPK3Q96L96 AL589739.1-201ENST00000607720 493 ntBASIC18.4■□□□□ 0.54
ALPK3Q96L96 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ALPK3Q96L96 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ALPK3Q96L96 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.4■□□□□ 0.54
ALPK3Q96L96 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ALPK3Q96L96 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ALPK3Q96L96 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ALPK3Q96L96 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.39■□□□□ 0.54
ALPK3Q96L96 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
ALPK3Q96L96 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ALPK3Q96L96 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ALPK3Q96L96 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ALPK3Q96L96 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ALPK3Q96L96 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.39■□□□□ 0.53
ALPK3Q96L96 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.39■□□□□ 0.53
ALPK3Q96L96 TMEM261P1-201ENST00000604899 340 ntBASIC18.39■□□□□ 0.53
ALPK3Q96L96 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ALPK3Q96L96 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
ALPK3Q96L96 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.39■□□□□ 0.53
ALPK3Q96L96 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ALPK3Q96L96 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ALPK3Q96L96 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ALPK3Q96L96 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
ALPK3Q96L96 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
ALPK3Q96L96 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ALPK3Q96L96 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ALPK3Q96L96 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ALPK3Q96L96 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ALPK3Q96L96 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.39■□□□□ 0.53
ALPK3Q96L96 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ALPK3Q96L96 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ALPK3Q96L96 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.39■□□□□ 0.53
ALPK3Q96L96 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.39■□□□□ 0.53
ALPK3Q96L96 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ALPK3Q96L96 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ALPK3Q96L96 LINC00895-201ENST00000629028 1637 ntBASIC18.39■□□□□ 0.53
ALPK3Q96L96 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
ALPK3Q96L96 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ALPK3Q96L96 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ALPK3Q96L96 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
ALPK3Q96L96 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALPK3Q96L96 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALPK3Q96L96 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.38■□□□□ 0.53
ALPK3Q96L96 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALPK3Q96L96 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.38■□□□□ 0.53
ALPK3Q96L96 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALPK3Q96L96 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ALPK3Q96L96 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALPK3Q96L96 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.38■□□□□ 0.53
ALPK3Q96L96 HAUS4P1-201ENST00000406739 1145 ntBASIC18.38■□□□□ 0.53
ALPK3Q96L96 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.38■□□□□ 0.53
ALPK3Q96L96 CROCCP4-201ENST00000457096 498 ntBASIC18.38■□□□□ 0.53
ALPK3Q96L96 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.38■□□□□ 0.53
ALPK3Q96L96 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
ALPK3Q96L96 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC18.38■□□□□ 0.53
ALPK3Q96L96 AC023310.3-201ENST00000557027 670 ntBASIC18.38■□□□□ 0.53
ALPK3Q96L96 AC100756.1-201ENST00000562736 682 ntBASIC18.38■□□□□ 0.53
ALPK3Q96L96 AC138749.3-201ENST00000567691 622 ntBASIC18.38■□□□□ 0.53
ALPK3Q96L96 AC116165.1-201ENST00000611806 668 ntBASIC18.38■□□□□ 0.53
ALPK3Q96L96 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ALPK3Q96L96 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.38■□□□□ 0.53
ALPK3Q96L96 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALPK3Q96L96 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ALPK3Q96L96 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.38■□□□□ 0.53
ALPK3Q96L96 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALPK3Q96L96 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ALPK3Q96L96 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ALPK3Q96L96 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ALPK3Q96L96 AL035456.1-201ENST00000456064 1369 ntBASIC18.38■□□□□ 0.53
ALPK3Q96L96 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.37■□□□□ 0.53
ALPK3Q96L96 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.37■□□□□ 0.53
ALPK3Q96L96 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.37■□□□□ 0.53
ALPK3Q96L96 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ALPK3Q96L96 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
ALPK3Q96L96 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ALPK3Q96L96 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.37■□□□□ 0.53
ALPK3Q96L96 TPRX2P-201ENST00000535362 881 ntBASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms