Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 RNA5SP419-201ENST00000515908 135 ntBASIC17.73■□□□□ 0.43
IFT43Q96FT9 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
IFT43Q96FT9 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.73■□□□□ 0.43
IFT43Q96FT9 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
IFT43Q96FT9 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.73■□□□□ 0.43
IFT43Q96FT9 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
IFT43Q96FT9 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
IFT43Q96FT9 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
IFT43Q96FT9 AL049757.1-201ENST00000616842 1596 ntBASIC17.73■□□□□ 0.43
IFT43Q96FT9 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IFT43Q96FT9 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
IFT43Q96FT9 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
IFT43Q96FT9 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
IFT43Q96FT9 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
IFT43Q96FT9 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.73■□□□□ 0.43
IFT43Q96FT9 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
IFT43Q96FT9 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.73■□□□□ 0.43
IFT43Q96FT9 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IFT43Q96FT9 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.72■□□□□ 0.43
IFT43Q96FT9 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
IFT43Q96FT9 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
IFT43Q96FT9 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
IFT43Q96FT9 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
IFT43Q96FT9 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IFT43Q96FT9 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.72■□□□□ 0.43
IFT43Q96FT9 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
IFT43Q96FT9 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IFT43Q96FT9 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
IFT43Q96FT9 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
IFT43Q96FT9 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
IFT43Q96FT9 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IFT43Q96FT9 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.72■□□□□ 0.43
IFT43Q96FT9 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
IFT43Q96FT9 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.72■□□□□ 0.43
IFT43Q96FT9 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IFT43Q96FT9 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IFT43Q96FT9 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
IFT43Q96FT9 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IFT43Q96FT9 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.72■□□□□ 0.43
IFT43Q96FT9 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IFT43Q96FT9 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IFT43Q96FT9 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.72■□□□□ 0.43
IFT43Q96FT9 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.72■□□□□ 0.43
IFT43Q96FT9 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.72■□□□□ 0.43
IFT43Q96FT9 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.72■□□□□ 0.43
IFT43Q96FT9 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.72■□□□□ 0.43
IFT43Q96FT9 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.72■□□□□ 0.43
IFT43Q96FT9 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IFT43Q96FT9 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
IFT43Q96FT9 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.72■□□□□ 0.43
IFT43Q96FT9 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
IFT43Q96FT9 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.72■□□□□ 0.43
IFT43Q96FT9 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IFT43Q96FT9 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
IFT43Q96FT9 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
IFT43Q96FT9 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.72■□□□□ 0.43
IFT43Q96FT9 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.72■□□□□ 0.43
IFT43Q96FT9 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.72■□□□□ 0.43
IFT43Q96FT9 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
IFT43Q96FT9 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.72■□□□□ 0.43
IFT43Q96FT9 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
IFT43Q96FT9 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.71■□□□□ 0.43
IFT43Q96FT9 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
IFT43Q96FT9 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IFT43Q96FT9 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
IFT43Q96FT9 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IFT43Q96FT9 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
IFT43Q96FT9 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
IFT43Q96FT9 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
IFT43Q96FT9 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
IFT43Q96FT9 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.71■□□□□ 0.43
IFT43Q96FT9 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.71■□□□□ 0.43
IFT43Q96FT9 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.71■□□□□ 0.43
IFT43Q96FT9 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.71■□□□□ 0.43
IFT43Q96FT9 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
IFT43Q96FT9 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.71■□□□□ 0.43
IFT43Q96FT9 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.71■□□□□ 0.43
IFT43Q96FT9 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.71■□□□□ 0.43
IFT43Q96FT9 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
IFT43Q96FT9 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.71■□□□□ 0.43
IFT43Q96FT9 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
IFT43Q96FT9 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.71■□□□□ 0.43
IFT43Q96FT9 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
IFT43Q96FT9 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
IFT43Q96FT9 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.71■□□□□ 0.43
IFT43Q96FT9 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IFT43Q96FT9 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.71■□□□□ 0.43
IFT43Q96FT9 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
IFT43Q96FT9 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
IFT43Q96FT9 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IFT43Q96FT9 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
IFT43Q96FT9 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
IFT43Q96FT9 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IFT43Q96FT9 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.71■□□□□ 0.42
IFT43Q96FT9 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
IFT43Q96FT9 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
IFT43Q96FT9 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
IFT43Q96FT9 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
IFT43Q96FT9 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.7■□□□□ 0.42
IFT43Q96FT9 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms