Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 AC007967.2-201ENST00000432613 625 ntBASIC18.11■□□□□ 0.49
ATP2A3Q93084 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
ATP2A3Q93084 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.11■□□□□ 0.49
ATP2A3Q93084 DNAJB3-201ENST00000446806 729 ntBASIC18.11■□□□□ 0.49
ATP2A3Q93084 AC108751.1-201ENST00000490852 363 ntBASIC18.11■□□□□ 0.49
ATP2A3Q93084 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
ATP2A3Q93084 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.11■□□□□ 0.49
ATP2A3Q93084 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.11■□□□□ 0.49
ATP2A3Q93084 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2A3Q93084 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2A3Q93084 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2A3Q93084 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2A3Q93084 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2A3Q93084 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
ATP2A3Q93084 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2A3Q93084 AC132938.5-201ENST00000624980 1813 ntBASIC18.11■□□□□ 0.49
ATP2A3Q93084 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2A3Q93084 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
ATP2A3Q93084 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
ATP2A3Q93084 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.11■□□□□ 0.49
ATP2A3Q93084 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.11■□□□□ 0.49
ATP2A3Q93084 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
ATP2A3Q93084 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
ATP2A3Q93084 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
ATP2A3Q93084 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2A3Q93084 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
ATP2A3Q93084 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A3Q93084 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A3Q93084 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A3Q93084 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A3Q93084 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A3Q93084 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.1■□□□□ 0.49
ATP2A3Q93084 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A3Q93084 NCF1C-201ENST00000438382 1427 ntBASIC18.1■□□□□ 0.49
ATP2A3Q93084 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A3Q93084 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
ATP2A3Q93084 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.1■□□□□ 0.49
ATP2A3Q93084 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.1■□□□□ 0.49
ATP2A3Q93084 UPF3AP3-201ENST00000420996 769 ntBASIC18.1■□□□□ 0.49
ATP2A3Q93084 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.1■□□□□ 0.49
ATP2A3Q93084 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A3Q93084 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A3Q93084 MIR3687-2-201ENST00000577708 61 ntBASIC18.1■□□□□ 0.49
ATP2A3Q93084 MIR3687-1-201ENST00000614492 61 ntBASIC18.1■□□□□ 0.49
ATP2A3Q93084 AC004706.3-202ENST00000621574 984 ntBASIC18.1■□□□□ 0.49
ATP2A3Q93084 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
ATP2A3Q93084 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
ATP2A3Q93084 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
ATP2A3Q93084 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A3Q93084 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A3Q93084 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A3Q93084 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A3Q93084 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A3Q93084 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A3Q93084 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A3Q93084 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.09■□□□□ 0.49
ATP2A3Q93084 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A3Q93084 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
ATP2A3Q93084 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A3Q93084 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.09■□□□□ 0.49
ATP2A3Q93084 BX276092.7-203ENST00000637198 1536 ntBASIC18.09■□□□□ 0.49
ATP2A3Q93084 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A3Q93084 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.09■□□□□ 0.49
ATP2A3Q93084 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A3Q93084 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A3Q93084 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A3Q93084 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A3Q93084 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.09■□□□□ 0.49
ATP2A3Q93084 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A3Q93084 SIGLEC30P-201ENST00000455569 941 ntBASIC18.09■□□□□ 0.49
ATP2A3Q93084 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
ATP2A3Q93084 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.09■□□□□ 0.49
ATP2A3Q93084 AC002347.1-201ENST00000569543 541 ntBASIC18.09■□□□□ 0.49
ATP2A3Q93084 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.09■□□□□ 0.49
ATP2A3Q93084 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.09■□□□□ 0.49
ATP2A3Q93084 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.09■□□□□ 0.49
ATP2A3Q93084 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.09■□□□□ 0.49
ATP2A3Q93084 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.09■□□□□ 0.49
ATP2A3Q93084 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A3Q93084 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
ATP2A3Q93084 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
ATP2A3Q93084 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A3Q93084 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.09■□□□□ 0.49
ATP2A3Q93084 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.09■□□□□ 0.49
ATP2A3Q93084 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.09■□□□□ 0.49
ATP2A3Q93084 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A3Q93084 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
ATP2A3Q93084 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A3Q93084 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ATP2A3Q93084 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ATP2A3Q93084 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.08■□□□□ 0.49
ATP2A3Q93084 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
ATP2A3Q93084 AL645608.8-201ENST00000606034 2086 ntBASIC18.08■□□□□ 0.49
ATP2A3Q93084 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
ATP2A3Q93084 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.08■□□□□ 0.49
ATP2A3Q93084 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
ATP2A3Q93084 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ATP2A3Q93084 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.08■□□□□ 0.48
ATP2A3Q93084 YBX2P1-201ENST00000394192 760 ntBASIC18.08■□□□□ 0.48
ATP2A3Q93084 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms