Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.25■□□□□ 0.19
TM9SF4Q92544 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.25■□□□□ 0.19
TM9SF4Q92544 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TM9SF4Q92544 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TM9SF4Q92544 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TM9SF4Q92544 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TM9SF4Q92544 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.25■□□□□ 0.19
TM9SF4Q92544 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TM9SF4Q92544 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.25■□□□□ 0.19
TM9SF4Q92544 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TM9SF4Q92544 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TM9SF4Q92544 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.25■□□□□ 0.19
TM9SF4Q92544 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TM9SF4Q92544 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TM9SF4Q92544 KRT18P55-202ENST00000578578 1546 ntBASIC16.24■□□□□ 0.19
TM9SF4Q92544 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TM9SF4Q92544 AC132938.6-201ENST00000623828 1655 ntBASIC16.24■□□□□ 0.19
TM9SF4Q92544 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TM9SF4Q92544 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TM9SF4Q92544 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TM9SF4Q92544 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TM9SF4Q92544 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TM9SF4Q92544 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
TM9SF4Q92544 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TM9SF4Q92544 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.24■□□□□ 0.19
TM9SF4Q92544 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TM9SF4Q92544 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.24■□□□□ 0.19
TM9SF4Q92544 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.24■□□□□ 0.19
TM9SF4Q92544 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.24■□□□□ 0.19
TM9SF4Q92544 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.24■□□□□ 0.19
TM9SF4Q92544 SPDYE21P-201ENST00000413323 827 ntBASIC16.24■□□□□ 0.19
TM9SF4Q92544 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.24■□□□□ 0.19
TM9SF4Q92544 GPX1P2-201ENST00000429271 606 ntBASIC16.24■□□□□ 0.19
TM9SF4Q92544 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.24■□□□□ 0.19
TM9SF4Q92544 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TM9SF4Q92544 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
TM9SF4Q92544 AC136632.2-201ENST00000512891 861 ntBASIC16.24■□□□□ 0.19
TM9SF4Q92544 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.24■□□□□ 0.19
TM9SF4Q92544 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.24■□□□□ 0.19
TM9SF4Q92544 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.24■□□□□ 0.19
TM9SF4Q92544 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.24■□□□□ 0.19
TM9SF4Q92544 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.24■□□□□ 0.19
TM9SF4Q92544 AC010327.4-202ENST00000591484 748 ntBASIC16.24■□□□□ 0.19
TM9SF4Q92544 AL589182.2-201ENST00000619332 1049 ntBASIC16.24■□□□□ 0.19
TM9SF4Q92544 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.24■□□□□ 0.19
TM9SF4Q92544 AD001527.2-201ENST00000622994 785 ntBASIC16.24■□□□□ 0.19
TM9SF4Q92544 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TM9SF4Q92544 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TM9SF4Q92544 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TM9SF4Q92544 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TM9SF4Q92544 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TM9SF4Q92544 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TM9SF4Q92544 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.23■□□□□ 0.19
TM9SF4Q92544 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TM9SF4Q92544 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
TM9SF4Q92544 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TM9SF4Q92544 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TM9SF4Q92544 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
TM9SF4Q92544 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TM9SF4Q92544 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TM9SF4Q92544 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TM9SF4Q92544 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TM9SF4Q92544 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.23■□□□□ 0.19
TM9SF4Q92544 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TM9SF4Q92544 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TM9SF4Q92544 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TM9SF4Q92544 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
TM9SF4Q92544 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TM9SF4Q92544 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TM9SF4Q92544 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TM9SF4Q92544 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.23■□□□□ 0.19
TM9SF4Q92544 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
TM9SF4Q92544 YBX2P1-201ENST00000394192 760 ntBASIC16.23■□□□□ 0.19
TM9SF4Q92544 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.23■□□□□ 0.19
TM9SF4Q92544 AL020989.1-201ENST00000422979 469 ntBASIC16.23■□□□□ 0.19
TM9SF4Q92544 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TM9SF4Q92544 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TM9SF4Q92544 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.23■□□□□ 0.19
TM9SF4Q92544 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.23■□□□□ 0.19
TM9SF4Q92544 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.23■□□□□ 0.19
TM9SF4Q92544 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.23■□□□□ 0.19
TM9SF4Q92544 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.23■□□□□ 0.19
TM9SF4Q92544 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TM9SF4Q92544 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.23■□□□□ 0.19
TM9SF4Q92544 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.23■□□□□ 0.19
TM9SF4Q92544 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TM9SF4Q92544 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TM9SF4Q92544 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TM9SF4Q92544 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TM9SF4Q92544 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TM9SF4Q92544 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TM9SF4Q92544 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.23■□□□□ 0.19
TM9SF4Q92544 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TM9SF4Q92544 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TM9SF4Q92544 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TM9SF4Q92544 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TM9SF4Q92544 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.22■□□□□ 0.19
TM9SF4Q92544 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TM9SF4Q92544 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TM9SF4Q92544 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms