Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CHD1LQ86WJ1 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CHD1LQ86WJ1 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CHD1LQ86WJ1 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CHD1LQ86WJ1 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHD1LQ86WJ1 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
CHD1LQ86WJ1 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHD1LQ86WJ1 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
CHD1LQ86WJ1 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHD1LQ86WJ1 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CHD1LQ86WJ1 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC21.18■□□□□ 0.98
CHD1LQ86WJ1 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHD1LQ86WJ1 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHD1LQ86WJ1 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHD1LQ86WJ1 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHD1LQ86WJ1 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CHD1LQ86WJ1 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CHD1LQ86WJ1 AP002414.1-201ENST00000391405 1147 ntBASIC21.18■□□□□ 0.98
CHD1LQ86WJ1 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC21.18■□□□□ 0.98
CHD1LQ86WJ1 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC21.18■□□□□ 0.98
CHD1LQ86WJ1 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHD1LQ86WJ1 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC21.18■□□□□ 0.98
CHD1LQ86WJ1 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC21.18■□□□□ 0.98
CHD1LQ86WJ1 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHD1LQ86WJ1 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHD1LQ86WJ1 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHD1LQ86WJ1 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHD1LQ86WJ1 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CHD1LQ86WJ1 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHD1LQ86WJ1 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC21.18■□□□□ 0.98
CHD1LQ86WJ1 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC21.18■□□□□ 0.98
CHD1LQ86WJ1 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC21.17■□□□□ 0.98
CHD1LQ86WJ1 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHD1LQ86WJ1 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC21.17■□□□□ 0.98
CHD1LQ86WJ1 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHD1LQ86WJ1 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHD1LQ86WJ1 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC21.17■□□□□ 0.98
CHD1LQ86WJ1 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHD1LQ86WJ1 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHD1LQ86WJ1 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHD1LQ86WJ1 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHD1LQ86WJ1 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHD1LQ86WJ1 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC21.17■□□□□ 0.98
CHD1LQ86WJ1 LSM5-204ENST00000409909 740 ntTSL 2 BASIC21.17■□□□□ 0.98
CHD1LQ86WJ1 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CHD1LQ86WJ1 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC21.17■□□□□ 0.98
CHD1LQ86WJ1 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC21.17■□□□□ 0.98
CHD1LQ86WJ1 NKAPP1-205ENST00000585790 367 ntBASIC21.17■□□□□ 0.98
CHD1LQ86WJ1 AC064862.7-201ENST00000604520 867 ntBASIC21.17■□□□□ 0.98
CHD1LQ86WJ1 AL353135.1-201ENST00000606729 504 ntBASIC21.17■□□□□ 0.98
CHD1LQ86WJ1 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC21.17■□□□□ 0.98
CHD1LQ86WJ1 AL590787.1-201ENST00000568856 1315 ntBASIC21.17■□□□□ 0.98
CHD1LQ86WJ1 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHD1LQ86WJ1 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC21.17■□□□□ 0.98
CHD1LQ86WJ1 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHD1LQ86WJ1 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC21.17■□□□□ 0.98
CHD1LQ86WJ1 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
CHD1LQ86WJ1 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHD1LQ86WJ1 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CHD1LQ86WJ1 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC21.17■□□□□ 0.98
CHD1LQ86WJ1 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHD1LQ86WJ1 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHD1LQ86WJ1 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC21.17■□□□□ 0.98
CHD1LQ86WJ1 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
CHD1LQ86WJ1 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC21.17■□□□□ 0.98
CHD1LQ86WJ1 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC21.17■□□□□ 0.98
CHD1LQ86WJ1 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHD1LQ86WJ1 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHD1LQ86WJ1 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHD1LQ86WJ1 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC21.16■□□□□ 0.98
CHD1LQ86WJ1 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC21.16■□□□□ 0.98
CHD1LQ86WJ1 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHD1LQ86WJ1 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
CHD1LQ86WJ1 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHD1LQ86WJ1 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC21.16■□□□□ 0.98
CHD1LQ86WJ1 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHD1LQ86WJ1 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHD1LQ86WJ1 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHD1LQ86WJ1 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC21.16■□□□□ 0.98
CHD1LQ86WJ1 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHD1LQ86WJ1 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC21.16■□□□□ 0.98
CHD1LQ86WJ1 MIR3652-201ENST00000579335 131 ntBASIC21.16■□□□□ 0.98
CHD1LQ86WJ1 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHD1LQ86WJ1 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC21.16■□□□□ 0.98
CHD1LQ86WJ1 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHD1LQ86WJ1 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHD1LQ86WJ1 TNRC18P3-201ENST00000441896 2691 ntBASIC21.16■□□□□ 0.98
CHD1LQ86WJ1 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
CHD1LQ86WJ1 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC21.16■□□□□ 0.98
CHD1LQ86WJ1 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
CHD1LQ86WJ1 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHD1LQ86WJ1 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHD1LQ86WJ1 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC21.15■□□□□ 0.98
CHD1LQ86WJ1 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHD1LQ86WJ1 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC21.15■□□□□ 0.98
CHD1LQ86WJ1 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHD1LQ86WJ1 TUBB8P12-201ENST00000308911 1335 ntBASIC21.15■□□□□ 0.98
CHD1LQ86WJ1 TUBB7P-202ENST00000428444 1305 ntBASIC21.15■□□□□ 0.98
CHD1LQ86WJ1 TUBB8P7-204ENST00000567960 1332 ntBASIC21.15■□□□□ 0.98
CHD1LQ86WJ1 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms