Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC62Q6P9F0 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC62Q6P9F0 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC62Q6P9F0 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC62Q6P9F0 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC62Q6P9F0 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CCDC62Q6P9F0 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
CCDC62Q6P9F0 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC62Q6P9F0 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC62Q6P9F0 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC62Q6P9F0 AL139400.1-201ENST00000366220 510 ntBASIC19.24■□□□□ 0.67
CCDC62Q6P9F0 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC62Q6P9F0 AC004461.1-201ENST00000412461 403 ntBASIC19.24■□□□□ 0.67
CCDC62Q6P9F0 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CCDC62Q6P9F0 CYMP-203ENST00000474680 1263 ntBASIC19.24■□□□□ 0.67
CCDC62Q6P9F0 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CCDC62Q6P9F0 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC62Q6P9F0 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.24■□□□□ 0.67
CCDC62Q6P9F0 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.24■□□□□ 0.67
CCDC62Q6P9F0 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CCDC62Q6P9F0 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.24■□□□□ 0.67
CCDC62Q6P9F0 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CCDC62Q6P9F0 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC62Q6P9F0 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC62Q6P9F0 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC62Q6P9F0 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CCDC62Q6P9F0 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC62Q6P9F0 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC62Q6P9F0 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC62Q6P9F0 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
CCDC62Q6P9F0 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
CCDC62Q6P9F0 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC62Q6P9F0 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC62Q6P9F0 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC62Q6P9F0 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC62Q6P9F0 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC62Q6P9F0 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC62Q6P9F0 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC62Q6P9F0 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC62Q6P9F0 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC62Q6P9F0 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC62Q6P9F0 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC62Q6P9F0 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC62Q6P9F0 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC62Q6P9F0 AL645939.2-201ENST00000427340 991 ntBASIC19.23■□□□□ 0.67
CCDC62Q6P9F0 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.23■□□□□ 0.67
CCDC62Q6P9F0 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC62Q6P9F0 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC62Q6P9F0 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.23■□□□□ 0.67
CCDC62Q6P9F0 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC62Q6P9F0 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.23■□□□□ 0.67
CCDC62Q6P9F0 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CCDC62Q6P9F0 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC62Q6P9F0 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC62Q6P9F0 AC018470.1-201ENST00000624790 3129 ntBASIC19.23■□□□□ 0.67
CCDC62Q6P9F0 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC62Q6P9F0 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC62Q6P9F0 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC62Q6P9F0 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CCDC62Q6P9F0 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC62Q6P9F0 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC62Q6P9F0 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC62Q6P9F0 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
CCDC62Q6P9F0 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC62Q6P9F0 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC62Q6P9F0 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC62Q6P9F0 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC62Q6P9F0 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC62Q6P9F0 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CCDC62Q6P9F0 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC62Q6P9F0 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC62Q6P9F0 AC022145.2-201ENST00000598203 171 ntBASIC19.22■□□□□ 0.67
CCDC62Q6P9F0 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC62Q6P9F0 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC62Q6P9F0 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC62Q6P9F0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC62Q6P9F0 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC62Q6P9F0 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC62Q6P9F0 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC62Q6P9F0 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC62Q6P9F0 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC62Q6P9F0 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC62Q6P9F0 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC62Q6P9F0 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC62Q6P9F0 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC62Q6P9F0 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC62Q6P9F0 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CCDC62Q6P9F0 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC62Q6P9F0 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC62Q6P9F0 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC62Q6P9F0 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC62Q6P9F0 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC62Q6P9F0 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC62Q6P9F0 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC62Q6P9F0 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC62Q6P9F0 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.21■□□□□ 0.67
CCDC62Q6P9F0 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.21■□□□□ 0.67
CCDC62Q6P9F0 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC62Q6P9F0 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC62Q6P9F0 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms