Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 AL136038.3-201ENST00000561909 1096 ntBASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 AC104640.1-201ENST00000562617 2109 ntBASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 AC022898.2-201ENST00000616822 1312 ntBASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 REXO1L9P-201ENST00000604264 2108 ntBASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 TSPY12P-201ENST00000421279 868 ntBASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 AC010331.1-201ENST00000611423 582 ntBASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 AC004263.2-201ENST00000617183 678 ntBASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
TMEM53Q6P2H8 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 FLJ13224-201ENST00000313737 1514 ntBASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 ARMC10P1-201ENST00000313754 855 ntBASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms