Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
PRAMEF17Q5VTA0 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PRAMEF17Q5VTA0 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PRAMEF17Q5VTA0 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PRAMEF17Q5VTA0 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.37■□□□□ 0.21
PRAMEF17Q5VTA0 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PRAMEF17Q5VTA0 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PRAMEF17Q5VTA0 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.36■□□□□ 0.21
PRAMEF17Q5VTA0 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF17Q5VTA0 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF17Q5VTA0 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF17Q5VTA0 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF17Q5VTA0 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF17Q5VTA0 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.36■□□□□ 0.21
PRAMEF17Q5VTA0 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF17Q5VTA0 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF17Q5VTA0 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF17Q5VTA0 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF17Q5VTA0 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.36■□□□□ 0.21
PRAMEF17Q5VTA0 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.36■□□□□ 0.21
PRAMEF17Q5VTA0 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.36■□□□□ 0.21
PRAMEF17Q5VTA0 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.36■□□□□ 0.21
PRAMEF17Q5VTA0 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.36■□□□□ 0.21
PRAMEF17Q5VTA0 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.36■□□□□ 0.21
PRAMEF17Q5VTA0 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.36■□□□□ 0.21
PRAMEF17Q5VTA0 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.36■□□□□ 0.21
PRAMEF17Q5VTA0 AC010654.1-201ENST00000615722 808 ntBASIC16.36■□□□□ 0.21
PRAMEF17Q5VTA0 AC010507.1-201ENST00000633895 436 ntBASIC16.36■□□□□ 0.21
PRAMEF17Q5VTA0 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PRAMEF17Q5VTA0 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.36■□□□□ 0.21
PRAMEF17Q5VTA0 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF17Q5VTA0 AC067852.2-201ENST00000590513 2313 ntBASIC16.36■□□□□ 0.21
PRAMEF17Q5VTA0 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF17Q5VTA0 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.36■□□□□ 0.21
PRAMEF17Q5VTA0 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PRAMEF17Q5VTA0 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF17Q5VTA0 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.36■□□□□ 0.21
PRAMEF17Q5VTA0 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF17Q5VTA0 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF17Q5VTA0 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.36■□□□□ 0.21
PRAMEF17Q5VTA0 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF17Q5VTA0 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF17Q5VTA0 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF17Q5VTA0 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.36■□□□□ 0.21
PRAMEF17Q5VTA0 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF17Q5VTA0 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF17Q5VTA0 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF17Q5VTA0 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.35■□□□□ 0.21
PRAMEF17Q5VTA0 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF17Q5VTA0 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF17Q5VTA0 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF17Q5VTA0 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.35■□□□□ 0.21
PRAMEF17Q5VTA0 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF17Q5VTA0 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF17Q5VTA0 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF17Q5VTA0 AC133963.1-201ENST00000504166 1679 ntBASIC16.35■□□□□ 0.21
PRAMEF17Q5VTA0 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
PRAMEF17Q5VTA0 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF17Q5VTA0 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.35■□□□□ 0.21
PRAMEF17Q5VTA0 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF17Q5VTA0 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.35■□□□□ 0.21
PRAMEF17Q5VTA0 SLC25A6P5-201ENST00000435663 894 ntBASIC16.35■□□□□ 0.21
PRAMEF17Q5VTA0 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.35■□□□□ 0.21
PRAMEF17Q5VTA0 MIR3687-2-201ENST00000577708 61 ntBASIC16.35■□□□□ 0.21
PRAMEF17Q5VTA0 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF17Q5VTA0 MIR3687-1-201ENST00000614492 61 ntBASIC16.35■□□□□ 0.21
PRAMEF17Q5VTA0 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF17Q5VTA0 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.35■□□□□ 0.21
PRAMEF17Q5VTA0 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF17Q5VTA0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.35■□□□□ 0.21
PRAMEF17Q5VTA0 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF17Q5VTA0 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF17Q5VTA0 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.35■□□□□ 0.21
PRAMEF17Q5VTA0 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF17Q5VTA0 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF17Q5VTA0 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.35■□□□□ 0.21
PRAMEF17Q5VTA0 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PRAMEF17Q5VTA0 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF17Q5VTA0 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.34■□□□□ 0.21
PRAMEF17Q5VTA0 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.34■□□□□ 0.21
PRAMEF17Q5VTA0 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PRAMEF17Q5VTA0 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF17Q5VTA0 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF17Q5VTA0 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF17Q5VTA0 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF17Q5VTA0 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF17Q5VTA0 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF17Q5VTA0 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF17Q5VTA0 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
PRAMEF17Q5VTA0 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.34■□□□□ 0.21
PRAMEF17Q5VTA0 DNAJB3-201ENST00000446806 729 ntBASIC16.34■□□□□ 0.21
PRAMEF17Q5VTA0 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.34■□□□□ 0.21
PRAMEF17Q5VTA0 ALG1L5P-201ENST00000482043 771 ntBASIC16.34■□□□□ 0.21
PRAMEF17Q5VTA0 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.34■□□□□ 0.21
PRAMEF17Q5VTA0 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PRAMEF17Q5VTA0 GGTLC5P-201ENST00000617623 998 ntBASIC16.34■□□□□ 0.21
PRAMEF17Q5VTA0 AC004877.2-201ENST00000623941 599 ntBASIC16.34■□□□□ 0.21
PRAMEF17Q5VTA0 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF17Q5VTA0 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
PRAMEF17Q5VTA0 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms