Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC14.94□□□□□ -0.02
ATPAF1Q5TC12 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ATPAF1Q5TC12 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATPAF1Q5TC12 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATPAF1Q5TC12 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATPAF1Q5TC12 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.94□□□□□ -0.02
ATPAF1Q5TC12 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ATPAF1Q5TC12 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATPAF1Q5TC12 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATPAF1Q5TC12 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATPAF1Q5TC12 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
ATPAF1Q5TC12 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATPAF1Q5TC12 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
ATPAF1Q5TC12 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ATPAF1Q5TC12 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATPAF1Q5TC12 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATPAF1Q5TC12 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ATPAF1Q5TC12 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
ATPAF1Q5TC12 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
ATPAF1Q5TC12 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.94□□□□□ -0.02
ATPAF1Q5TC12 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATPAF1Q5TC12 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.94□□□□□ -0.02
ATPAF1Q5TC12 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ATPAF1Q5TC12 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATPAF1Q5TC12 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
ATPAF1Q5TC12 REXO1L11P-201ENST00000620964 1927 ntBASIC14.94□□□□□ -0.02
ATPAF1Q5TC12 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATPAF1Q5TC12 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 AL845331.1-201ENST00000424978 1190 ntBASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 UPK3BP1-201ENST00000428678 509 ntBASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 VENTXP7-201ENST00000475503 772 ntBASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 MIR3180-1-201ENST00000580374 94 ntBASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 MIR3180-3-201ENST00000584616 94 ntBASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATPAF1Q5TC12 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ATPAF1Q5TC12 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC14.92□□□□□ -0.02
ATPAF1Q5TC12 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.92□□□□□ -0.02
ATPAF1Q5TC12 AC007326.2-201ENST00000624224 7579 ntBASIC14.92□□□□□ -0.02
ATPAF1Q5TC12 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
ATPAF1Q5TC12 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATPAF1Q5TC12 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ATPAF1Q5TC12 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ATPAF1Q5TC12 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATPAF1Q5TC12 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATPAF1Q5TC12 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATPAF1Q5TC12 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms