Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CHMP4BP1P59074 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP4BP1P59074 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CHMP4BP1P59074 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
CHMP4BP1P59074 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CHMP4BP1P59074 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CHMP4BP1P59074 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.64■□□□□ 0.74
CHMP4BP1P59074 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.64■□□□□ 0.74
CHMP4BP1P59074 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP4BP1P59074 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP4BP1P59074 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP4BP1P59074 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
CHMP4BP1P59074 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.64■□□□□ 0.73
CHMP4BP1P59074 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.64■□□□□ 0.73
CHMP4BP1P59074 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CHMP4BP1P59074 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.64■□□□□ 0.73
CHMP4BP1P59074 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CHMP4BP1P59074 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.64■□□□□ 0.73
CHMP4BP1P59074 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.64■□□□□ 0.73
CHMP4BP1P59074 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.64■□□□□ 0.73
CHMP4BP1P59074 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.64■□□□□ 0.73
CHMP4BP1P59074 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.64■□□□□ 0.73
CHMP4BP1P59074 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.64■□□□□ 0.73
CHMP4BP1P59074 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.64■□□□□ 0.73
CHMP4BP1P59074 MIR4751-201ENST00000578027 74 ntBASIC19.64■□□□□ 0.73
CHMP4BP1P59074 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.64■□□□□ 0.73
CHMP4BP1P59074 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CHMP4BP1P59074 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.64■□□□□ 0.73
CHMP4BP1P59074 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP4BP1P59074 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP4BP1P59074 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP4BP1P59074 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP4BP1P59074 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP4BP1P59074 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP4BP1P59074 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.64■□□□□ 0.73
CHMP4BP1P59074 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP4BP1P59074 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CHMP4BP1P59074 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP4BP1P59074 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CHMP4BP1P59074 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP4BP1P59074 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP4BP1P59074 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP4BP1P59074 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CHMP4BP1P59074 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP4BP1P59074 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP4BP1P59074 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.63■□□□□ 0.73
CHMP4BP1P59074 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP4BP1P59074 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP4BP1P59074 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
CHMP4BP1P59074 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP4BP1P59074 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP4BP1P59074 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CHMP4BP1P59074 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CHMP4BP1P59074 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CHMP4BP1P59074 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.63■□□□□ 0.73
CHMP4BP1P59074 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP4BP1P59074 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP4BP1P59074 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.63■□□□□ 0.73
CHMP4BP1P59074 AC006504.4-201ENST00000592118 1568 ntBASIC19.63■□□□□ 0.73
CHMP4BP1P59074 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP4BP1P59074 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.63■□□□□ 0.73
CHMP4BP1P59074 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP4BP1P59074 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP4BP1P59074 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP4BP1P59074 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP4BP1P59074 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP4BP1P59074 AC073621.1-201ENST00000392730 636 ntBASIC19.63■□□□□ 0.73
CHMP4BP1P59074 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP4BP1P59074 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP4BP1P59074 KLF4P1-201ENST00000412782 1185 ntBASIC19.63■□□□□ 0.73
CHMP4BP1P59074 KRT18P2-201ENST00000447938 1258 ntBASIC19.63■□□□□ 0.73
CHMP4BP1P59074 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.63■□□□□ 0.73
CHMP4BP1P59074 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.63■□□□□ 0.73
CHMP4BP1P59074 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CHMP4BP1P59074 AC134684.3-201ENST00000641758 218 ntBASIC19.63■□□□□ 0.73
CHMP4BP1P59074 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP4BP1P59074 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
CHMP4BP1P59074 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP4BP1P59074 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP4BP1P59074 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP4BP1P59074 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CHMP4BP1P59074 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP4BP1P59074 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP4BP1P59074 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP4BP1P59074 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.62■□□□□ 0.73
CHMP4BP1P59074 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP4BP1P59074 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP4BP1P59074 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.62■□□□□ 0.73
CHMP4BP1P59074 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.62■□□□□ 0.73
CHMP4BP1P59074 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP4BP1P59074 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP4BP1P59074 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP4BP1P59074 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP4BP1P59074 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP4BP1P59074 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP4BP1P59074 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP4BP1P59074 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
CHMP4BP1P59074 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.62■□□□□ 0.73
CHMP4BP1P59074 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP4BP1P59074 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms