Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
EPHB4P54760 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
EPHB4P54760 AC148477.5-201ENST00000625164 1645 ntBASIC19.29■□□□□ 0.68
EPHB4P54760 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
EPHB4P54760 AC108860.2-201ENST00000562760 2183 ntBASIC19.29■□□□□ 0.68
EPHB4P54760 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
EPHB4P54760 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
EPHB4P54760 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
EPHB4P54760 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
EPHB4P54760 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.29■□□□□ 0.68
EPHB4P54760 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
EPHB4P54760 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
EPHB4P54760 AC004461.1-201ENST00000412461 403 ntBASIC19.29■□□□□ 0.68
EPHB4P54760 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
EPHB4P54760 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.29■□□□□ 0.68
EPHB4P54760 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC19.29■□□□□ 0.68
EPHB4P54760 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.29■□□□□ 0.68
EPHB4P54760 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.29■□□□□ 0.68
EPHB4P54760 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.29■□□□□ 0.68
EPHB4P54760 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
EPHB4P54760 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
EPHB4P54760 FLJ13224-201ENST00000313737 1514 ntBASIC19.29■□□□□ 0.68
EPHB4P54760 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
EPHB4P54760 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
EPHB4P54760 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
EPHB4P54760 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
EPHB4P54760 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
EPHB4P54760 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.28■□□□□ 0.68
EPHB4P54760 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EPHB4P54760 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.28■□□□□ 0.68
EPHB4P54760 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.28■□□□□ 0.68
EPHB4P54760 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
EPHB4P54760 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
EPHB4P54760 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
EPHB4P54760 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EPHB4P54760 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EPHB4P54760 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
EPHB4P54760 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EPHB4P54760 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.28■□□□□ 0.68
EPHB4P54760 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EPHB4P54760 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EPHB4P54760 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC19.28■□□□□ 0.68
EPHB4P54760 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.28■□□□□ 0.68
EPHB4P54760 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
EPHB4P54760 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EPHB4P54760 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EPHB4P54760 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EPHB4P54760 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
EPHB4P54760 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.28■□□□□ 0.68
EPHB4P54760 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EPHB4P54760 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
EPHB4P54760 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
EPHB4P54760 OR6D1P-202ENST00000641007 5290 ntBASIC19.28■□□□□ 0.68
EPHB4P54760 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
EPHB4P54760 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.27■□□□□ 0.68
EPHB4P54760 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
EPHB4P54760 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
EPHB4P54760 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
EPHB4P54760 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
EPHB4P54760 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
EPHB4P54760 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.27■□□□□ 0.68
EPHB4P54760 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
EPHB4P54760 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
EPHB4P54760 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
EPHB4P54760 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
EPHB4P54760 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.27■□□□□ 0.68
EPHB4P54760 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.27■□□□□ 0.68
EPHB4P54760 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.27■□□□□ 0.68
EPHB4P54760 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.27■□□□□ 0.68
EPHB4P54760 AL020989.1-201ENST00000422979 469 ntBASIC19.27■□□□□ 0.68
EPHB4P54760 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
EPHB4P54760 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.27■□□□□ 0.68
EPHB4P54760 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.27■□□□□ 0.68
EPHB4P54760 AC096734.2-201ENST00000562054 433 ntBASIC19.27■□□□□ 0.68
EPHB4P54760 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
EPHB4P54760 AL390955.2-201ENST00000603032 514 ntBASIC19.27■□□□□ 0.68
EPHB4P54760 AC004835.2-201ENST00000603762 682 ntBASIC19.27■□□□□ 0.68
EPHB4P54760 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
EPHB4P54760 AC091812.2-201ENST00000619081 385 ntBASIC19.27■□□□□ 0.68
EPHB4P54760 AF228730.6-201ENST00000641497 218 ntBASIC19.27■□□□□ 0.68
EPHB4P54760 AC084121.3-201ENST00000641716 218 ntBASIC19.27■□□□□ 0.68
EPHB4P54760 AC105233.6-201ENST00000642093 218 ntBASIC19.27■□□□□ 0.68
EPHB4P54760 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
EPHB4P54760 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
EPHB4P54760 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
EPHB4P54760 AC084018.2-201ENST00000613093 2607 ntBASIC19.27■□□□□ 0.68
EPHB4P54760 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
EPHB4P54760 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
EPHB4P54760 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.27■□□□□ 0.67
EPHB4P54760 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
EPHB4P54760 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.26■□□□□ 0.67
EPHB4P54760 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
EPHB4P54760 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
EPHB4P54760 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
EPHB4P54760 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
EPHB4P54760 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
EPHB4P54760 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
EPHB4P54760 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
EPHB4P54760 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
EPHB4P54760 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms