Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PMS1P54277 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PMS1P54277 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PMS1P54277 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.88■□□□□ 0.61
PMS1P54277 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PMS1P54277 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.88■□□□□ 0.61
PMS1P54277 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PMS1P54277 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PMS1P54277 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PMS1P54277 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PMS1P54277 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PMS1P54277 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PMS1P54277 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PMS1P54277 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PMS1P54277 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PMS1P54277 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PMS1P54277 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.87■□□□□ 0.61
PMS1P54277 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PMS1P54277 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PMS1P54277 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PMS1P54277 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.87■□□□□ 0.61
PMS1P54277 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PMS1P54277 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PMS1P54277 KRT16P4-201ENST00000453883 522 ntBASIC18.87■□□□□ 0.61
PMS1P54277 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PMS1P54277 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PMS1P54277 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PMS1P54277 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PMS1P54277 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.87■□□□□ 0.61
PMS1P54277 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.87■□□□□ 0.61
PMS1P54277 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
PMS1P54277 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.87■□□□□ 0.61
PMS1P54277 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.87■□□□□ 0.61
PMS1P54277 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.87■□□□□ 0.61
PMS1P54277 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.87■□□□□ 0.61
PMS1P54277 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PMS1P54277 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PMS1P54277 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PMS1P54277 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PMS1P54277 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
PMS1P54277 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PMS1P54277 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PMS1P54277 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PMS1P54277 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PMS1P54277 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PMS1P54277 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.86■□□□□ 0.61
PMS1P54277 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.86■□□□□ 0.61
PMS1P54277 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.86■□□□□ 0.61
PMS1P54277 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PMS1P54277 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PMS1P54277 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PMS1P54277 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
PMS1P54277 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
PMS1P54277 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
PMS1P54277 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
PMS1P54277 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
PMS1P54277 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PMS1P54277 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PMS1P54277 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PMS1P54277 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
PMS1P54277 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PMS1P54277 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.86■□□□□ 0.61
PMS1P54277 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.86■□□□□ 0.61
PMS1P54277 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.86■□□□□ 0.61
PMS1P54277 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
PMS1P54277 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.86■□□□□ 0.61
PMS1P54277 AC106795.1-205ENST00000512851 1056 ntBASIC18.86■□□□□ 0.61
PMS1P54277 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PMS1P54277 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.86■□□□□ 0.61
PMS1P54277 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PMS1P54277 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.86■□□□□ 0.61
PMS1P54277 AC018695.7-201ENST00000624587 2492 ntBASIC18.86■□□□□ 0.61
PMS1P54277 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
PMS1P54277 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PMS1P54277 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PMS1P54277 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.86■□□□□ 0.61
PMS1P54277 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
PMS1P54277 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
PMS1P54277 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PMS1P54277 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
PMS1P54277 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PMS1P54277 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PMS1P54277 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.85■□□□□ 0.61
PMS1P54277 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.85■□□□□ 0.61
PMS1P54277 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.85■□□□□ 0.61
PMS1P54277 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.85■□□□□ 0.61
PMS1P54277 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PMS1P54277 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PMS1P54277 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PMS1P54277 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.85■□□□□ 0.61
PMS1P54277 AC064862.7-201ENST00000604520 867 ntBASIC18.85■□□□□ 0.61
PMS1P54277 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
PMS1P54277 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.85■□□□□ 0.61
PMS1P54277 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
PMS1P54277 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PMS1P54277 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PMS1P54277 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.85■□□□□ 0.61
PMS1P54277 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.85■□□□□ 0.61
PMS1P54277 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.85■□□□□ 0.61
PMS1P54277 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms