Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
PDE6CP51160 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDE6CP51160 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDE6CP51160 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PDE6CP51160 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDE6CP51160 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PDE6CP51160 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
PDE6CP51160 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDE6CP51160 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDE6CP51160 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PDE6CP51160 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.57■□□□□ 0.56
PDE6CP51160 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDE6CP51160 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.57■□□□□ 0.56
PDE6CP51160 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.57■□□□□ 0.56
PDE6CP51160 SLC25A1P3-201ENST00000395415 828 ntBASIC18.57■□□□□ 0.56
PDE6CP51160 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
PDE6CP51160 AL031284.1-201ENST00000419297 478 ntBASIC18.57■□□□□ 0.56
PDE6CP51160 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.57■□□□□ 0.56
PDE6CP51160 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.57■□□□□ 0.56
PDE6CP51160 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.57■□□□□ 0.56
PDE6CP51160 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.57■□□□□ 0.56
PDE6CP51160 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDE6CP51160 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDE6CP51160 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDE6CP51160 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDE6CP51160 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDE6CP51160 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PDE6CP51160 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDE6CP51160 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.57■□□□□ 0.56
PDE6CP51160 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.57■□□□□ 0.56
PDE6CP51160 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDE6CP51160 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDE6CP51160 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDE6CP51160 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDE6CP51160 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PDE6CP51160 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PDE6CP51160 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDE6CP51160 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDE6CP51160 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PDE6CP51160 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDE6CP51160 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDE6CP51160 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDE6CP51160 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDE6CP51160 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.56■□□□□ 0.56
PDE6CP51160 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.56■□□□□ 0.56
PDE6CP51160 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.56■□□□□ 0.56
PDE6CP51160 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.56■□□□□ 0.56
PDE6CP51160 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDE6CP51160 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.56■□□□□ 0.56
PDE6CP51160 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.56■□□□□ 0.56
PDE6CP51160 AL139288.1-201ENST00000623748 933 ntBASIC18.56■□□□□ 0.56
PDE6CP51160 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.56■□□□□ 0.56
PDE6CP51160 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDE6CP51160 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.56■□□□□ 0.56
PDE6CP51160 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDE6CP51160 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDE6CP51160 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.56■□□□□ 0.56
PDE6CP51160 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.56■□□□□ 0.56
PDE6CP51160 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PDE6CP51160 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.56■□□□□ 0.56
PDE6CP51160 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDE6CP51160 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PDE6CP51160 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.55■□□□□ 0.56
PDE6CP51160 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
PDE6CP51160 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.55■□□□□ 0.56
PDE6CP51160 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.55■□□□□ 0.56
PDE6CP51160 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PDE6CP51160 LINC02012-201ENST00000608206 1725 ntBASIC18.55■□□□□ 0.56
PDE6CP51160 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.55■□□□□ 0.56
PDE6CP51160 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
PDE6CP51160 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDE6CP51160 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDE6CP51160 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.55■□□□□ 0.56
PDE6CP51160 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDE6CP51160 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.55■□□□□ 0.56
PDE6CP51160 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDE6CP51160 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDE6CP51160 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.55■□□□□ 0.56
PDE6CP51160 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDE6CP51160 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
PDE6CP51160 AC018712.1-201ENST00000455767 687 ntBASIC18.55■□□□□ 0.56
PDE6CP51160 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.55■□□□□ 0.56
PDE6CP51160 RNPS1P1-201ENST00000507437 918 ntBASIC18.55■□□□□ 0.56
PDE6CP51160 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.55■□□□□ 0.56
PDE6CP51160 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDE6CP51160 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.55■□□□□ 0.56
PDE6CP51160 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PDE6CP51160 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
PDE6CP51160 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDE6CP51160 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
PDE6CP51160 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDE6CP51160 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDE6CP51160 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.55■□□□□ 0.56
PDE6CP51160 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
PDE6CP51160 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDE6CP51160 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDE6CP51160 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDE6CP51160 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
PDE6CP51160 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
PDE6CP51160 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms