Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TNNI2P48788 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TNNI2P48788 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TNNI2P48788 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TNNI2P48788 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
TNNI2P48788 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TNNI2P48788 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNNI2P48788 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TNNI2P48788 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNNI2P48788 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TNNI2P48788 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TNNI2P48788 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.32■□□□□ 0.84
TNNI2P48788 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNNI2P48788 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNNI2P48788 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TNNI2P48788 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC20.32■□□□□ 0.84
TNNI2P48788 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNNI2P48788 AC079140.1-201ENST00000508039 487 ntBASIC20.32■□□□□ 0.84
TNNI2P48788 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TNNI2P48788 RNA5SP421-201ENST00000516864 134 ntBASIC20.32■□□□□ 0.84
TNNI2P48788 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.32■□□□□ 0.84
TNNI2P48788 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TNNI2P48788 TSFM-210ENST00000550559 897 ntTSL 5 BASIC20.32■□□□□ 0.84
TNNI2P48788 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNNI2P48788 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC20.32■□□□□ 0.84
TNNI2P48788 Z92544.3-201ENST00000624747 417 ntBASIC20.32■□□□□ 0.84
TNNI2P48788 NOC2LP1-202ENST00000452600 2235 ntBASIC20.32■□□□□ 0.84
TNNI2P48788 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC20.32■□□□□ 0.84
TNNI2P48788 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
TNNI2P48788 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNNI2P48788 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TNNI2P48788 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNNI2P48788 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
TNNI2P48788 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNNI2P48788 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TNNI2P48788 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.31■□□□□ 0.84
TNNI2P48788 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TNNI2P48788 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC20.31■□□□□ 0.84
TNNI2P48788 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
TNNI2P48788 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TNNI2P48788 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNNI2P48788 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.31■□□□□ 0.84
TNNI2P48788 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
TNNI2P48788 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNNI2P48788 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TNNI2P48788 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNNI2P48788 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.31■□□□□ 0.84
TNNI2P48788 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNNI2P48788 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNNI2P48788 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNNI2P48788 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNNI2P48788 KRT18P32-201ENST00000424695 1287 ntBASIC20.31■□□□□ 0.84
TNNI2P48788 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC20.31■□□□□ 0.84
TNNI2P48788 CNN2P2-201ENST00000443536 909 ntBASIC20.31■□□□□ 0.84
TNNI2P48788 CNN2P3-201ENST00000450201 906 ntBASIC20.31■□□□□ 0.84
TNNI2P48788 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC20.31■□□□□ 0.84
TNNI2P48788 RARRES2P8-201ENST00000566335 367 ntBASIC20.31■□□□□ 0.84
TNNI2P48788 AL136317.3-201ENST00000618497 906 ntBASIC20.31■□□□□ 0.84
TNNI2P48788 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNNI2P48788 AL161645.1-201ENST00000622716 1255 ntBASIC20.31■□□□□ 0.84
TNNI2P48788 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNNI2P48788 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
TNNI2P48788 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNNI2P48788 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNNI2P48788 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC20.31■□□□□ 0.84
TNNI2P48788 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.31■□□□□ 0.84
TNNI2P48788 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.31■□□□□ 0.84
TNNI2P48788 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TNNI2P48788 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
TNNI2P48788 AKAP8P1-201ENST00000434743 1349 ntBASIC20.3■□□□□ 0.84
TNNI2P48788 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
TNNI2P48788 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNNI2P48788 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TNNI2P48788 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.3■□□□□ 0.84
TNNI2P48788 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.3■□□□□ 0.84
TNNI2P48788 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNNI2P48788 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
TNNI2P48788 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.3■□□□□ 0.84
TNNI2P48788 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
TNNI2P48788 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC20.3■□□□□ 0.84
TNNI2P48788 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TNNI2P48788 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TNNI2P48788 AC069335.1-201ENST00000489972 472 ntBASIC20.3■□□□□ 0.84
TNNI2P48788 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC20.3■□□□□ 0.84
TNNI2P48788 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC20.3■□□□□ 0.84
TNNI2P48788 VPS29-207ENST00000549970 818 ntTSL 3 BASIC20.3■□□□□ 0.84
TNNI2P48788 INO80C-206ENST00000586489 594 ntTSL 3 BASIC20.3■□□□□ 0.84
TNNI2P48788 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.3■□□□□ 0.84
TNNI2P48788 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TNNI2P48788 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.3■□□□□ 0.84
TNNI2P48788 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNNI2P48788 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNNI2P48788 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TNNI2P48788 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.3■□□□□ 0.84
TNNI2P48788 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNNI2P48788 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
TNNI2P48788 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNNI2P48788 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
TNNI2P48788 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNNI2P48788 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms