Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.14■□□□□ 0.49
CHKAP35790 MIR7706-201ENST00000613747 67 ntBASIC18.14■□□□□ 0.49
CHKAP35790 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.14■□□□□ 0.49
CHKAP35790 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CHKAP35790 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHKAP35790 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CHKAP35790 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.14■□□□□ 0.49
CHKAP35790 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.14■□□□□ 0.49
CHKAP35790 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.14■□□□□ 0.49
CHKAP35790 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHKAP35790 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.14■□□□□ 0.49
CHKAP35790 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHKAP35790 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.13■□□□□ 0.49
CHKAP35790 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHKAP35790 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
CHKAP35790 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
CHKAP35790 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHKAP35790 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHKAP35790 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CHKAP35790 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHKAP35790 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHKAP35790 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHKAP35790 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.13■□□□□ 0.49
CHKAP35790 LAGE3P1-201ENST00000425356 484 ntBASIC18.13■□□□□ 0.49
CHKAP35790 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.13■□□□□ 0.49
CHKAP35790 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.13■□□□□ 0.49
CHKAP35790 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.13■□□□□ 0.49
CHKAP35790 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.13■□□□□ 0.49
CHKAP35790 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.13■□□□□ 0.49
CHKAP35790 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.13■□□□□ 0.49
CHKAP35790 AC109462.3-201ENST00000573934 613 ntBASIC18.13■□□□□ 0.49
CHKAP35790 AL049840.3-201ENST00000602669 611 ntBASIC18.13■□□□□ 0.49
CHKAP35790 AC019129.2-201ENST00000609837 1235 ntBASIC18.13■□□□□ 0.49
CHKAP35790 AC008735.5-201ENST00000623544 497 ntBASIC18.13■□□□□ 0.49
CHKAP35790 AC116407.3-201ENST00000623905 1129 ntBASIC18.13■□□□□ 0.49
CHKAP35790 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.13■□□□□ 0.49
CHKAP35790 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHKAP35790 AC243591.1-201ENST00000452967 1364 ntBASIC18.13■□□□□ 0.49
CHKAP35790 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CHKAP35790 AC018695.7-201ENST00000624587 2492 ntBASIC18.13■□□□□ 0.49
CHKAP35790 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHKAP35790 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CHKAP35790 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHKAP35790 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.13■□□□□ 0.49
CHKAP35790 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHKAP35790 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHKAP35790 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHKAP35790 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHKAP35790 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.12■□□□□ 0.49
CHKAP35790 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.12■□□□□ 0.49
CHKAP35790 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.12■□□□□ 0.49
CHKAP35790 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHKAP35790 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHKAP35790 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHKAP35790 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHKAP35790 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.12■□□□□ 0.49
CHKAP35790 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHKAP35790 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHKAP35790 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHKAP35790 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHKAP35790 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CHKAP35790 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHKAP35790 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.12■□□□□ 0.49
CHKAP35790 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHKAP35790 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHKAP35790 AC002558.1-201ENST00000488906 803 ntBASIC18.12■□□□□ 0.49
CHKAP35790 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.12■□□□□ 0.49
CHKAP35790 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHKAP35790 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.12■□□□□ 0.49
CHKAP35790 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CHKAP35790 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHKAP35790 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.12■□□□□ 0.49
CHKAP35790 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CHKAP35790 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHKAP35790 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CHKAP35790 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CHKAP35790 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CHKAP35790 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHKAP35790 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHKAP35790 AC132938.5-201ENST00000624980 1813 ntBASIC18.12■□□□□ 0.49
CHKAP35790 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHKAP35790 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
CHKAP35790 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHKAP35790 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.11■□□□□ 0.49
CHKAP35790 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHKAP35790 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHKAP35790 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHKAP35790 MYCLP1-201ENST00000372451 1075 ntBASIC18.11■□□□□ 0.49
CHKAP35790 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.11■□□□□ 0.49
CHKAP35790 KLF4P1-201ENST00000412782 1185 ntBASIC18.11■□□□□ 0.49
CHKAP35790 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.11■□□□□ 0.49
CHKAP35790 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.11■□□□□ 0.49
CHKAP35790 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.11■□□□□ 0.49
CHKAP35790 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.11■□□□□ 0.49
CHKAP35790 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.11■□□□□ 0.49
CHKAP35790 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.11■□□□□ 0.49
CHKAP35790 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHKAP35790 LYSMD4-203ENST00000378904 2122 ntBASIC18.11■□□□□ 0.49
CHKAP35790 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.11■□□□□ 0.49
CHKAP35790 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms