Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT9P35527 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.8■□□□□ 0.6
KRT9P35527 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT9P35527 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT9P35527 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT9P35527 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT9P35527 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.8■□□□□ 0.6
KRT9P35527 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KRT9P35527 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
KRT9P35527 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
KRT9P35527 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT9P35527 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT9P35527 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT9P35527 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.8■□□□□ 0.6
KRT9P35527 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
KRT9P35527 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.8■□□□□ 0.6
KRT9P35527 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.8■□□□□ 0.6
KRT9P35527 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.8■□□□□ 0.6
KRT9P35527 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.8■□□□□ 0.6
KRT9P35527 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT9P35527 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT9P35527 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT9P35527 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KRT9P35527 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.8■□□□□ 0.6
KRT9P35527 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.8■□□□□ 0.6
KRT9P35527 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.8■□□□□ 0.6
KRT9P35527 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KRT9P35527 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT9P35527 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT9P35527 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
KRT9P35527 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.8■□□□□ 0.6
KRT9P35527 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
KRT9P35527 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.8■□□□□ 0.6
KRT9P35527 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT9P35527 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT9P35527 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT9P35527 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KRT9P35527 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
KRT9P35527 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KRT9P35527 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT9P35527 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
KRT9P35527 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.79■□□□□ 0.6
KRT9P35527 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.79■□□□□ 0.6
KRT9P35527 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KRT9P35527 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.79■□□□□ 0.6
KRT9P35527 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT9P35527 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KRT9P35527 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT9P35527 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
KRT9P35527 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
KRT9P35527 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT9P35527 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.79■□□□□ 0.6
KRT9P35527 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT9P35527 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KRT9P35527 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.79■□□□□ 0.6
KRT9P35527 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
KRT9P35527 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KRT9P35527 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
KRT9P35527 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.79■□□□□ 0.6
KRT9P35527 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
KRT9P35527 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KRT9P35527 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.79■□□□□ 0.6
KRT9P35527 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.79■□□□□ 0.6
KRT9P35527 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KRT9P35527 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.79■□□□□ 0.6
KRT9P35527 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.79■□□□□ 0.6
KRT9P35527 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.79■□□□□ 0.6
KRT9P35527 AC005336.2-201ENST00000593183 939 ntBASIC18.79■□□□□ 0.6
KRT9P35527 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
KRT9P35527 AL138831.2-201ENST00000606564 490 ntBASIC18.79■□□□□ 0.6
KRT9P35527 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT9P35527 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KRT9P35527 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
KRT9P35527 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT9P35527 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KRT9P35527 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
KRT9P35527 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT9P35527 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KRT9P35527 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT9P35527 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT9P35527 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT9P35527 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KRT9P35527 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.78■□□□□ 0.6
KRT9P35527 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT9P35527 EGFEM1P-202ENST00000431685 1563 ntBASIC18.78■□□□□ 0.6
KRT9P35527 AL049757.1-201ENST00000616842 1596 ntBASIC18.78■□□□□ 0.6
KRT9P35527 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT9P35527 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT9P35527 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT9P35527 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT9P35527 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.78■□□□□ 0.6
KRT9P35527 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT9P35527 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KRT9P35527 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.78■□□□□ 0.6
KRT9P35527 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.78■□□□□ 0.6
KRT9P35527 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.78■□□□□ 0.6
KRT9P35527 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
KRT9P35527 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.78■□□□□ 0.6
KRT9P35527 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT9P35527 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms