Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLTAP09496 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.79■□□□□ 0.6
CLTAP09496 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CLTAP09496 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.79■□□□□ 0.6
CLTAP09496 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLTAP09496 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLTAP09496 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLTAP09496 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLTAP09496 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLTAP09496 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.78■□□□□ 0.6
CLTAP09496 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLTAP09496 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLTAP09496 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLTAP09496 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.78■□□□□ 0.6
CLTAP09496 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.78■□□□□ 0.6
CLTAP09496 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLTAP09496 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLTAP09496 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLTAP09496 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.78■□□□□ 0.6
CLTAP09496 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.78■□□□□ 0.6
CLTAP09496 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.78■□□□□ 0.6
CLTAP09496 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.78■□□□□ 0.6
CLTAP09496 RNA5SP415-201ENST00000517246 115 ntBASIC18.78■□□□□ 0.6
CLTAP09496 SLC25A1P1-201ENST00000528351 927 ntBASIC18.78■□□□□ 0.6
CLTAP09496 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLTAP09496 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.78■□□□□ 0.6
CLTAP09496 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.78■□□□□ 0.6
CLTAP09496 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.78■□□□□ 0.6
CLTAP09496 AC145285.3-201ENST00000564603 959 ntBASIC18.78■□□□□ 0.6
CLTAP09496 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.78■□□□□ 0.6
CLTAP09496 AF228730.7-201ENST00000641842 219 ntBASIC18.78■□□□□ 0.6
CLTAP09496 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLTAP09496 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CLTAP09496 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CLTAP09496 CROCCP2-202ENST00000412962 2773 ntBASIC18.78■□□□□ 0.6
CLTAP09496 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLTAP09496 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLTAP09496 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLTAP09496 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLTAP09496 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CLTAP09496 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLTAP09496 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLTAP09496 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
CLTAP09496 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CLTAP09496 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.77■□□□□ 0.6
CLTAP09496 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CLTAP09496 AC016396.2-201ENST00000562575 1417 ntBASIC18.77■□□□□ 0.6
CLTAP09496 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.77■□□□□ 0.6
CLTAP09496 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.77■□□□□ 0.6
CLTAP09496 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLTAP09496 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.77■□□□□ 0.6
CLTAP09496 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLTAP09496 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
CLTAP09496 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.77■□□□□ 0.6
CLTAP09496 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.77■□□□□ 0.6
CLTAP09496 UNC93B6-202ENST00000528242 690 ntBASIC18.77■□□□□ 0.6
CLTAP09496 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLTAP09496 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.77■□□□□ 0.6
CLTAP09496 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLTAP09496 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLTAP09496 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.77■□□□□ 0.6
CLTAP09496 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CLTAP09496 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CLTAP09496 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.76■□□□□ 0.59
CLTAP09496 AL590787.1-201ENST00000568856 1315 ntBASIC18.76■□□□□ 0.59
CLTAP09496 AC008894.3-201ENST00000624324 3103 ntBASIC18.76■□□□□ 0.59
CLTAP09496 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLTAP09496 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.76■□□□□ 0.59
CLTAP09496 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CLTAP09496 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.76■□□□□ 0.59
CLTAP09496 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CLTAP09496 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.76■□□□□ 0.59
CLTAP09496 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLTAP09496 RPS15P9-201ENST00000494093 319 ntBASIC18.76■□□□□ 0.59
CLTAP09496 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.76■□□□□ 0.59
CLTAP09496 AC106730.1-201ENST00000566722 1090 ntBASIC18.76■□□□□ 0.59
CLTAP09496 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.76■□□□□ 0.59
CLTAP09496 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CLTAP09496 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLTAP09496 AL805961.1-202ENST00000641562 540 ntBASIC18.76■□□□□ 0.59
CLTAP09496 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLTAP09496 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CLTAP09496 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.76■□□□□ 0.59
CLTAP09496 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.76■□□□□ 0.59
CLTAP09496 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.76■□□□□ 0.59
CLTAP09496 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLTAP09496 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLTAP09496 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLTAP09496 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLTAP09496 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLTAP09496 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLTAP09496 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CLTAP09496 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLTAP09496 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLTAP09496 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLTAP09496 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLTAP09496 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLTAP09496 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLTAP09496 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLTAP09496 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms