Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RETP07949 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RETP07949 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RETP07949 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RETP07949 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RETP07949 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RETP07949 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.3■□□□□ 0.36
RETP07949 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RETP07949 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RETP07949 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RETP07949 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RETP07949 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RETP07949 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.3■□□□□ 0.36
RETP07949 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.3■□□□□ 0.36
RETP07949 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RETP07949 AC002472.2-201ENST00000442739 958 ntBASIC17.3■□□□□ 0.36
RETP07949 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RETP07949 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.3■□□□□ 0.36
RETP07949 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RETP07949 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
RETP07949 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.3■□□□□ 0.36
RETP07949 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.3■□□□□ 0.36
RETP07949 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.3■□□□□ 0.36
RETP07949 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.3■□□□□ 0.36
RETP07949 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RETP07949 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
RETP07949 AC139713.2-201ENST00000641328 2723 ntBASIC17.3■□□□□ 0.36
RETP07949 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RETP07949 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.3■□□□□ 0.36
RETP07949 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RETP07949 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RETP07949 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
RETP07949 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RETP07949 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RETP07949 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RETP07949 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RETP07949 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RETP07949 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
RETP07949 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RETP07949 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RETP07949 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.29■□□□□ 0.36
RETP07949 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RETP07949 AL049757.1-201ENST00000616842 1596 ntBASIC17.29■□□□□ 0.36
RETP07949 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RETP07949 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.29■□□□□ 0.36
RETP07949 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.29■□□□□ 0.36
RETP07949 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RETP07949 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RETP07949 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
RETP07949 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.29■□□□□ 0.36
RETP07949 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RETP07949 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RETP07949 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.29■□□□□ 0.36
RETP07949 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.29■□□□□ 0.36
RETP07949 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RETP07949 AC009093.7-201ENST00000623853 1223 ntBASIC17.29■□□□□ 0.36
RETP07949 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.29■□□□□ 0.36
RETP07949 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.29■□□□□ 0.36
RETP07949 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RETP07949 AC012317.2-201ENST00000623305 2251 ntBASIC17.29■□□□□ 0.36
RETP07949 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.29■□□□□ 0.36
RETP07949 AC132938.6-201ENST00000623828 1655 ntBASIC17.29■□□□□ 0.36
RETP07949 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
RETP07949 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RETP07949 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RETP07949 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RETP07949 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
RETP07949 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.29■□□□□ 0.36
RETP07949 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RETP07949 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.28■□□□□ 0.36
RETP07949 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RETP07949 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.28■□□□□ 0.36
RETP07949 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RETP07949 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RETP07949 AL096828.2-201ENST00000567259 1965 ntBASIC17.28■□□□□ 0.36
RETP07949 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.28■□□□□ 0.36
RETP07949 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RETP07949 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RETP07949 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RETP07949 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RETP07949 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RETP07949 AC236430.1-201ENST00000402231 743 ntBASIC17.28■□□□□ 0.36
RETP07949 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.28■□□□□ 0.36
RETP07949 AC055876.3-201ENST00000431496 288 ntBASIC17.28■□□□□ 0.36
RETP07949 CNN2P2-201ENST00000443536 909 ntBASIC17.28■□□□□ 0.36
RETP07949 CNN2P3-201ENST00000450201 906 ntBASIC17.28■□□□□ 0.36
RETP07949 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RETP07949 CXCL1P1-201ENST00000502804 216 ntBASIC17.28■□□□□ 0.36
RETP07949 AC112191.1-201ENST00000523689 701 ntBASIC17.28■□□□□ 0.36
RETP07949 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RETP07949 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RETP07949 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RETP07949 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.28■□□□□ 0.36
RETP07949 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.28■□□□□ 0.36
RETP07949 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.28■□□□□ 0.36
RETP07949 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RETP07949 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RETP07949 AC138649.4-201ENST00000612222 287 ntBASIC17.28■□□□□ 0.36
RETP07949 AL136317.3-201ENST00000618497 906 ntBASIC17.28■□□□□ 0.36
RETP07949 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms