Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RB1P06400 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RB1P06400 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RB1P06400 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.01■□□□□ 0.47
RB1P06400 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.01■□□□□ 0.47
RB1P06400 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.01■□□□□ 0.47
RB1P06400 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RB1P06400 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.01■□□□□ 0.47
RB1P06400 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RB1P06400 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RB1P06400 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
RB1P06400 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.01■□□□□ 0.47
RB1P06400 MRPS18AP1-201ENST00000414458 589 ntBASIC18.01■□□□□ 0.47
RB1P06400 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.01■□□□□ 0.47
RB1P06400 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.01■□□□□ 0.47
RB1P06400 AC027369.6-201ENST00000525520 931 ntBASIC18.01■□□□□ 0.47
RB1P06400 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.01■□□□□ 0.47
RB1P06400 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.01■□□□□ 0.47
RB1P06400 AL596325.1-201ENST00000563991 1082 ntBASIC18.01■□□□□ 0.47
RB1P06400 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
RB1P06400 AC091167.2-201ENST00000579581 588 ntBASIC18.01■□□□□ 0.47
RB1P06400 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.01■□□□□ 0.47
RB1P06400 AL008721.1-201ENST00000609964 604 ntBASIC18.01■□□□□ 0.47
RB1P06400 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.01■□□□□ 0.47
RB1P06400 AL590560.3-201ENST00000623350 461 ntBASIC18.01■□□□□ 0.47
RB1P06400 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RB1P06400 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.01■□□□□ 0.47
RB1P06400 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.01■□□□□ 0.47
RB1P06400 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.01■□□□□ 0.47
RB1P06400 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RB1P06400 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
RB1P06400 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.01■□□□□ 0.47
RB1P06400 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RB1P06400 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
RB1P06400 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
RB1P06400 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RB1P06400 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RB1P06400 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RB1P06400 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
RB1P06400 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RB1P06400 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.01■□□□□ 0.47
RB1P06400 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.01■□□□□ 0.47
RB1P06400 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18■□□□□ 0.47
RB1P06400 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18■□□□□ 0.47
RB1P06400 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18■□□□□ 0.47
RB1P06400 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18■□□□□ 0.47
RB1P06400 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RB1P06400 HLA-DQB1-201ENST00000374943 1656 ntBASIC18■□□□□ 0.47
RB1P06400 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RB1P06400 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RB1P06400 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
RB1P06400 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RB1P06400 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18■□□□□ 0.47
RB1P06400 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18■□□□□ 0.47
RB1P06400 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RB1P06400 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18■□□□□ 0.47
RB1P06400 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
RB1P06400 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18■□□□□ 0.47
RB1P06400 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18■□□□□ 0.47
RB1P06400 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18■□□□□ 0.47
RB1P06400 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18■□□□□ 0.47
RB1P06400 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18■□□□□ 0.47
RB1P06400 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
RB1P06400 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18■□□□□ 0.47
RB1P06400 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18■□□□□ 0.47
RB1P06400 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18■□□□□ 0.47
RB1P06400 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
RB1P06400 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18■□□□□ 0.47
RB1P06400 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18■□□□□ 0.47
RB1P06400 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RB1P06400 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18■□□□□ 0.47
RB1P06400 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RB1P06400 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RB1P06400 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RB1P06400 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.99■□□□□ 0.47
RB1P06400 AC100757.3-201ENST00000622361 1406 ntBASIC17.99■□□□□ 0.47
RB1P06400 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RB1P06400 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.99■□□□□ 0.47
RB1P06400 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RB1P06400 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.99■□□□□ 0.47
RB1P06400 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
RB1P06400 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.99■□□□□ 0.47
RB1P06400 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RB1P06400 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RB1P06400 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.99■□□□□ 0.47
RB1P06400 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.99■□□□□ 0.47
RB1P06400 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.99■□□□□ 0.47
RB1P06400 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RB1P06400 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.99■□□□□ 0.47
RB1P06400 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.99■□□□□ 0.47
RB1P06400 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.99■□□□□ 0.47
RB1P06400 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.99■□□□□ 0.47
RB1P06400 AP001350.2-201ENST00000625104 1094 ntBASIC17.99■□□□□ 0.47
RB1P06400 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
RB1P06400 HCG11-201ENST00000411553 5696 ntBASIC17.99■□□□□ 0.47
RB1P06400 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RB1P06400 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RB1P06400 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RB1P06400 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RB1P06400 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms