Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TIMP1P01033 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TIMP1P01033 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
TIMP1P01033 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TIMP1P01033 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.34■□□□□ 0.53
TIMP1P01033 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TIMP1P01033 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TIMP1P01033 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
TIMP1P01033 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.34■□□□□ 0.53
TIMP1P01033 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.34■□□□□ 0.53
TIMP1P01033 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
TIMP1P01033 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TIMP1P01033 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.34■□□□□ 0.53
TIMP1P01033 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TIMP1P01033 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.34■□□□□ 0.53
TIMP1P01033 AL844908.2-201ENST00000609461 460 ntBASIC18.34■□□□□ 0.53
TIMP1P01033 IGHV3-72-202ENST00000621503 303 ntBASIC18.34■□□□□ 0.53
TIMP1P01033 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TIMP1P01033 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.34■□□□□ 0.53
TIMP1P01033 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TIMP1P01033 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TIMP1P01033 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TIMP1P01033 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TIMP1P01033 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
TIMP1P01033 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
TIMP1P01033 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.33■□□□□ 0.53
TIMP1P01033 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TIMP1P01033 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.33■□□□□ 0.53
TIMP1P01033 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.33■□□□□ 0.52
TIMP1P01033 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TIMP1P01033 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TIMP1P01033 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.33■□□□□ 0.52
TIMP1P01033 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.33■□□□□ 0.52
TIMP1P01033 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TIMP1P01033 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TIMP1P01033 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TIMP1P01033 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.33■□□□□ 0.52
TIMP1P01033 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TIMP1P01033 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TIMP1P01033 INE1-201ENST00000456273 945 ntBASIC18.33■□□□□ 0.52
TIMP1P01033 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC18.33■□□□□ 0.52
TIMP1P01033 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC18.33■□□□□ 0.52
TIMP1P01033 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.33■□□□□ 0.52
TIMP1P01033 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.33■□□□□ 0.52
TIMP1P01033 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.33■□□□□ 0.52
TIMP1P01033 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.33■□□□□ 0.52
TIMP1P01033 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TIMP1P01033 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TIMP1P01033 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
TIMP1P01033 AL162274.1-201ENST00000617191 1098 ntBASIC18.33■□□□□ 0.52
TIMP1P01033 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.33■□□□□ 0.52
TIMP1P01033 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.33■□□□□ 0.52
TIMP1P01033 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TIMP1P01033 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TIMP1P01033 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TIMP1P01033 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TIMP1P01033 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
TIMP1P01033 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TIMP1P01033 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TIMP1P01033 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.32■□□□□ 0.52
TIMP1P01033 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TIMP1P01033 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TIMP1P01033 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
TIMP1P01033 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TIMP1P01033 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TIMP1P01033 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TIMP1P01033 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TIMP1P01033 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TIMP1P01033 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TIMP1P01033 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.32■□□□□ 0.52
TIMP1P01033 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TIMP1P01033 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
TIMP1P01033 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
TIMP1P01033 DGCR5-201ENST00000399539 862 ntBASIC18.32■□□□□ 0.52
TIMP1P01033 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.32■□□□□ 0.52
TIMP1P01033 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TIMP1P01033 RPS2P32-201ENST00000439199 892 ntBASIC18.32■□□□□ 0.52
TIMP1P01033 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
TIMP1P01033 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.32■□□□□ 0.52
TIMP1P01033 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
TIMP1P01033 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TIMP1P01033 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TIMP1P01033 AC021097.1-201ENST00000607902 574 ntBASIC18.32■□□□□ 0.52
TIMP1P01033 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.32■□□□□ 0.52
TIMP1P01033 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.32■□□□□ 0.52
TIMP1P01033 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.32■□□□□ 0.52
TIMP1P01033 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.32■□□□□ 0.52
TIMP1P01033 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TIMP1P01033 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TIMP1P01033 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.32■□□□□ 0.52
TIMP1P01033 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TIMP1P01033 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TIMP1P01033 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.32■□□□□ 0.52
TIMP1P01033 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TIMP1P01033 AC131009.4-201ENST00000624048 1740 ntBASIC18.32■□□□□ 0.52
TIMP1P01033 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TIMP1P01033 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TIMP1P01033 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TIMP1P01033 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.31■□□□□ 0.52
TIMP1P01033 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms