Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ABCA1O95477 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.41□□□□□ -0.1
ABCA1O95477 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ABCA1O95477 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
ABCA1O95477 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ABCA1O95477 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
ABCA1O95477 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
ABCA1O95477 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ABCA1O95477 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ABCA1O95477 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
ABCA1O95477 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ABCA1O95477 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ABCA1O95477 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
ABCA1O95477 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ABCA1O95477 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ABCA1O95477 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ABCA1O95477 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
ABCA1O95477 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
ABCA1O95477 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.4□□□□□ -0.1
ABCA1O95477 AC134043.2-201ENST00000624206 2238 ntBASIC14.4□□□□□ -0.1
ABCA1O95477 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ABCA1O95477 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.4□□□□□ -0.1
ABCA1O95477 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ABCA1O95477 MRPL20P1-201ENST00000400819 433 ntBASIC14.4□□□□□ -0.1
ABCA1O95477 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ABCA1O95477 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.4□□□□□ -0.1
ABCA1O95477 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ABCA1O95477 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.4□□□□□ -0.1
ABCA1O95477 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.4□□□□□ -0.1
ABCA1O95477 AC004790.2-201ENST00000623588 572 ntBASIC14.4□□□□□ -0.1
ABCA1O95477 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.4□□□□□ -0.1
ABCA1O95477 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ABCA1O95477 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ABCA1O95477 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.4□□□□□ -0.1
ABCA1O95477 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ABCA1O95477 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ABCA1O95477 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ABCA1O95477 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ABCA1O95477 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
ABCA1O95477 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
ABCA1O95477 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ABCA1O95477 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ABCA1O95477 PODN-203ENST00000395871 2744 ntTSL 5 BASIC14.4□□□□□ -0.1
ABCA1O95477 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ABCA1O95477 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ABCA1O95477 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ABCA1O95477 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ABCA1O95477 AL353593.2-201ENST00000602529 1483 ntBASIC14.4□□□□□ -0.1
ABCA1O95477 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.4□□□□□ -0.1
ABCA1O95477 SIGLEC30P-201ENST00000455569 941 ntBASIC14.4□□□□□ -0.1
ABCA1O95477 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ABCA1O95477 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.4□□□□□ -0.1
ABCA1O95477 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
ABCA1O95477 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.4□□□□□ -0.1
ABCA1O95477 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.4□□□□□ -0.1
ABCA1O95477 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.4□□□□□ -0.1
ABCA1O95477 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.4□□□□□ -0.1
ABCA1O95477 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.4□□□□□ -0.1
ABCA1O95477 AC105339.1-204ENST00000636249 355 ntBASIC14.4□□□□□ -0.1
ABCA1O95477 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC14.4□□□□□ -0.1
ABCA1O95477 AC025580.3-201ENST00000617932 1424 ntBASIC14.4□□□□□ -0.1
ABCA1O95477 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ABCA1O95477 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.4□□□□□ -0.1
ABCA1O95477 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ABCA1O95477 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ABCA1O95477 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
ABCA1O95477 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ABCA1O95477 FLYWCH1P1-201ENST00000460917 1874 ntBASIC14.39□□□□□ -0.11
ABCA1O95477 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ABCA1O95477 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ABCA1O95477 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ABCA1O95477 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ABCA1O95477 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.39□□□□□ -0.11
ABCA1O95477 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ABCA1O95477 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.39□□□□□ -0.11
ABCA1O95477 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.39□□□□□ -0.11
ABCA1O95477 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ABCA1O95477 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.39□□□□□ -0.11
ABCA1O95477 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ABCA1O95477 Z92544.3-201ENST00000624747 417 ntBASIC14.39□□□□□ -0.11
ABCA1O95477 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
ABCA1O95477 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.39□□□□□ -0.11
ABCA1O95477 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ABCA1O95477 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
ABCA1O95477 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ABCA1O95477 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.39□□□□□ -0.11
ABCA1O95477 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
ABCA1O95477 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ABCA1O95477 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ABCA1O95477 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ABCA1O95477 AL354751.1-201ENST00000412768 1863 ntBASIC14.39□□□□□ -0.11
ABCA1O95477 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
ABCA1O95477 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ABCA1O95477 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ABCA1O95477 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.39□□□□□ -0.11
ABCA1O95477 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ABCA1O95477 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ABCA1O95477 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
ABCA1O95477 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
ABCA1O95477 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms