Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
USH2AO75445 MPRIPP1-201ENST00000452433 1089 ntBASIC7.55□□□□□ -1.2
USH2AO75445 HIST2H2BC-201ENST00000498492 580 ntBASIC7.55□□□□□ -1.2
USH2AO75445 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC7.55□□□□□ -1.2
USH2AO75445 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
USH2AO75445 DERL2-202ENST00000570848 657 ntTSL 5 BASIC7.55□□□□□ -1.2
USH2AO75445 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
USH2AO75445 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC7.55□□□□□ -1.2
USH2AO75445 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC7.55□□□□□ -1.2
USH2AO75445 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC7.55□□□□□ -1.2
USH2AO75445 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC7.55□□□□□ -1.2
USH2AO75445 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
USH2AO75445 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
USH2AO75445 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC7.55□□□□□ -1.2
USH2AO75445 ENSA-206ENST00000361631 725 ntTSL 2 BASIC7.55□□□□□ -1.2
USH2AO75445 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
USH2AO75445 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC7.55□□□□□ -1.2
USH2AO75445 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC7.55□□□□□ -1.2
USH2AO75445 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
USH2AO75445 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
USH2AO75445 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC7.55□□□□□ -1.2
USH2AO75445 AC023310.3-201ENST00000557027 670 ntBASIC7.55□□□□□ -1.2
USH2AO75445 AC044860.1-202ENST00000559481 777 ntBASIC7.55□□□□□ -1.2
USH2AO75445 AC100756.1-201ENST00000562736 682 ntBASIC7.55□□□□□ -1.2
USH2AO75445 AC138749.3-201ENST00000567691 622 ntBASIC7.55□□□□□ -1.2
USH2AO75445 AC116165.1-201ENST00000611806 668 ntBASIC7.55□□□□□ -1.2
USH2AO75445 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
USH2AO75445 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC7.55□□□□□ -1.2
USH2AO75445 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC7.55□□□□□ -1.2
USH2AO75445 HNRNPRP1-201ENST00000453465 1695 ntBASIC7.55□□□□□ -1.2
USH2AO75445 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
USH2AO75445 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
USH2AO75445 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC7.55□□□□□ -1.2
USH2AO75445 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
USH2AO75445 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC7.55□□□□□ -1.2
USH2AO75445 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
USH2AO75445 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC7.55□□□□□ -1.2
USH2AO75445 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC7.55□□□□□ -1.2
USH2AO75445 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC7.55□□□□□ -1.2
USH2AO75445 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
USH2AO75445 SLC25A24P2-201ENST00000415059 510 ntBASIC7.55□□□□□ -1.2
USH2AO75445 GPAA1P2-201ENST00000417923 928 ntBASIC7.55□□□□□ -1.2
USH2AO75445 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC7.55□□□□□ -1.2
USH2AO75445 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC7.55□□□□□ -1.2
USH2AO75445 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC7.55□□□□□ -1.2
USH2AO75445 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC7.55□□□□□ -1.2
USH2AO75445 AL033527.5-201ENST00000641382 801 ntBASIC7.55□□□□□ -1.2
USH2AO75445 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
USH2AO75445 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
USH2AO75445 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC7.54□□□□□ -1.2
USH2AO75445 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
USH2AO75445 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
USH2AO75445 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC7.54□□□□□ -1.2
USH2AO75445 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
USH2AO75445 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC7.54□□□□□ -1.2
USH2AO75445 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
USH2AO75445 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
USH2AO75445 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC7.54□□□□□ -1.2
USH2AO75445 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
USH2AO75445 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC7.54□□□□□ -1.2
USH2AO75445 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC7.54□□□□□ -1.2
USH2AO75445 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
USH2AO75445 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
USH2AO75445 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC7.54□□□□□ -1.2
USH2AO75445 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
USH2AO75445 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
USH2AO75445 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC7.54□□□□□ -1.2
USH2AO75445 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
USH2AO75445 MIR4515-201ENST00000584082 81 ntBASIC7.54□□□□□ -1.2
USH2AO75445 WFDC1-204ENST00000613603 549 ntBASIC7.54□□□□□ -1.2
USH2AO75445 MIR8072-201ENST00000614241 80 ntBASIC7.54□□□□□ -1.2
USH2AO75445 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
USH2AO75445 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC7.54□□□□□ -1.2
USH2AO75445 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC7.54□□□□□ -1.2
USH2AO75445 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
USH2AO75445 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
USH2AO75445 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
USH2AO75445 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
USH2AO75445 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
USH2AO75445 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC7.54□□□□□ -1.2
USH2AO75445 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC7.54□□□□□ -1.2
USH2AO75445 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC7.54□□□□□ -1.2
USH2AO75445 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
USH2AO75445 KRT8P13-201ENST00000463294 1010 ntBASIC7.54□□□□□ -1.2
USH2AO75445 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
USH2AO75445 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC7.54□□□□□ -1.2
USH2AO75445 AC055876.2-201ENST00000531834 546 ntBASIC7.54□□□□□ -1.2
USH2AO75445 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
USH2AO75445 AC073389.1-201ENST00000595595 795 ntBASIC7.54□□□□□ -1.2
USH2AO75445 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
USH2AO75445 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
USH2AO75445 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
USH2AO75445 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
USH2AO75445 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
USH2AO75445 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
USH2AO75445 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
USH2AO75445 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
USH2AO75445 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
USH2AO75445 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
USH2AO75445 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms