Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.3■□□□□ 0.2
SCN2BO60939 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
SCN2BO60939 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCN2BO60939 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SCN2BO60939 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCN2BO60939 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCN2BO60939 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.3■□□□□ 0.2
SCN2BO60939 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.3■□□□□ 0.2
SCN2BO60939 TPSP2-201ENST00000561760 610 ntBASIC16.3■□□□□ 0.2
SCN2BO60939 AL049597.2-201ENST00000565575 961 ntBASIC16.3■□□□□ 0.2
SCN2BO60939 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SCN2BO60939 BNIP3P18-201ENST00000593976 575 ntBASIC16.3■□□□□ 0.2
SCN2BO60939 AC073592.5-201ENST00000624854 528 ntBASIC16.3■□□□□ 0.2
SCN2BO60939 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SCN2BO60939 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCN2BO60939 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.3■□□□□ 0.2
SCN2BO60939 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SCN2BO60939 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCN2BO60939 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SCN2BO60939 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.3■□□□□ 0.2
SCN2BO60939 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCN2BO60939 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.3■□□□□ 0.2
SCN2BO60939 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.3■□□□□ 0.2
SCN2BO60939 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCN2BO60939 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SCN2BO60939 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
SCN2BO60939 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SCN2BO60939 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.29■□□□□ 0.2
SCN2BO60939 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCN2BO60939 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SCN2BO60939 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SCN2BO60939 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.29■□□□□ 0.2
SCN2BO60939 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.29■□□□□ 0.2
SCN2BO60939 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.29■□□□□ 0.2
SCN2BO60939 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCN2BO60939 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCN2BO60939 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCN2BO60939 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SCN2BO60939 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCN2BO60939 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SCN2BO60939 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SCN2BO60939 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.29■□□□□ 0.2
SCN2BO60939 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCN2BO60939 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SCN2BO60939 IGHV3-47-201ENST00000425060 335 ntBASIC16.29■□□□□ 0.2
SCN2BO60939 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.29■□□□□ 0.2
SCN2BO60939 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.29■□□□□ 0.2
SCN2BO60939 VENTXP7-201ENST00000475503 772 ntBASIC16.29■□□□□ 0.2
SCN2BO60939 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SCN2BO60939 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.29■□□□□ 0.2
SCN2BO60939 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.29■□□□□ 0.2
SCN2BO60939 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.29■□□□□ 0.2
SCN2BO60939 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.29■□□□□ 0.2
SCN2BO60939 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.29■□□□□ 0.2
SCN2BO60939 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SCN2BO60939 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
SCN2BO60939 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.29■□□□□ 0.2
SCN2BO60939 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCN2BO60939 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCN2BO60939 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.29■□□□□ 0.2
SCN2BO60939 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.29■□□□□ 0.2
SCN2BO60939 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.29■□□□□ 0.2
SCN2BO60939 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCN2BO60939 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCN2BO60939 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCN2BO60939 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCN2BO60939 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCN2BO60939 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCN2BO60939 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.28■□□□□ 0.2
SCN2BO60939 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.28■□□□□ 0.2
SCN2BO60939 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
SCN2BO60939 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCN2BO60939 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCN2BO60939 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
SCN2BO60939 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCN2BO60939 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SCN2BO60939 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.28■□□□□ 0.2
SCN2BO60939 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCN2BO60939 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCN2BO60939 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCN2BO60939 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCN2BO60939 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.28■□□□□ 0.2
SCN2BO60939 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCN2BO60939 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SCN2BO60939 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.28■□□□□ 0.2
SCN2BO60939 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SCN2BO60939 TSSC2-201ENST00000450217 709 ntBASIC16.28■□□□□ 0.2
SCN2BO60939 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.28■□□□□ 0.2
SCN2BO60939 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SCN2BO60939 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.28■□□□□ 0.2
SCN2BO60939 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.28■□□□□ 0.2
SCN2BO60939 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.28■□□□□ 0.2
SCN2BO60939 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
SCN2BO60939 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.28■□□□□ 0.2
SCN2BO60939 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCN2BO60939 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
SCN2BO60939 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.28■□□□□ 0.2
SCN2BO60939 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCN2BO60939 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCN2BO60939 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms