Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SGCEO43556 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.24■□□□□ 0.03
SGCEO43556 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SGCEO43556 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SGCEO43556 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SGCEO43556 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SGCEO43556 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SGCEO43556 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SGCEO43556 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SGCEO43556 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.23■□□□□ 0.03
SGCEO43556 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SGCEO43556 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SGCEO43556 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.23■□□□□ 0.03
SGCEO43556 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SGCEO43556 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SGCEO43556 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SGCEO43556 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SGCEO43556 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SGCEO43556 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SGCEO43556 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.23■□□□□ 0.03
SGCEO43556 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SGCEO43556 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SGCEO43556 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.23■□□□□ 0.03
SGCEO43556 HCG4P8-203ENST00000443049 980 ntBASIC15.23■□□□□ 0.03
SGCEO43556 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SGCEO43556 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SGCEO43556 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SGCEO43556 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SGCEO43556 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SGCEO43556 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SGCEO43556 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SGCEO43556 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.23■□□□□ 0.03
SGCEO43556 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SGCEO43556 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SGCEO43556 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SGCEO43556 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SGCEO43556 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.23■□□□□ 0.03
SGCEO43556 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SGCEO43556 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SGCEO43556 AC009336.1-201ENST00000608941 1553 ntBASIC15.23■□□□□ 0.03
SGCEO43556 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SGCEO43556 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SGCEO43556 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SGCEO43556 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
SGCEO43556 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.23■□□□□ 0.03
SGCEO43556 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SGCEO43556 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SGCEO43556 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SGCEO43556 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SGCEO43556 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SGCEO43556 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SGCEO43556 AC116353.5-201ENST00000638148 1699 ntBASIC15.22■□□□□ 0.03
SGCEO43556 AP001094.4-201ENST00000579008 2176 ntBASIC15.22■□□□□ 0.03
SGCEO43556 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SGCEO43556 AC132938.5-201ENST00000624980 1813 ntBASIC15.22■□□□□ 0.03
SGCEO43556 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SGCEO43556 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SGCEO43556 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SGCEO43556 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
SGCEO43556 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SGCEO43556 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SGCEO43556 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SGCEO43556 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SGCEO43556 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SGCEO43556 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SGCEO43556 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
SGCEO43556 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SGCEO43556 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.22■□□□□ 0.03
SGCEO43556 KRT16P4-201ENST00000453883 522 ntBASIC15.22■□□□□ 0.03
SGCEO43556 MIR3652-201ENST00000579335 131 ntBASIC15.22■□□□□ 0.03
SGCEO43556 MIR5100-201ENST00000579544 119 ntBASIC15.22■□□□□ 0.03
SGCEO43556 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.22■□□□□ 0.03
SGCEO43556 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.22■□□□□ 0.03
SGCEO43556 AL591684.3-201ENST00000605187 298 ntBASIC15.22■□□□□ 0.03
SGCEO43556 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SGCEO43556 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SGCEO43556 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.22■□□□□ 0.03
SGCEO43556 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SGCEO43556 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SGCEO43556 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SGCEO43556 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SGCEO43556 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.22■□□□□ 0.03
SGCEO43556 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SGCEO43556 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SGCEO43556 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SGCEO43556 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
SGCEO43556 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SGCEO43556 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SGCEO43556 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SGCEO43556 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SGCEO43556 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SGCEO43556 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.21■□□□□ 0.03
SGCEO43556 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SGCEO43556 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
SGCEO43556 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SGCEO43556 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SGCEO43556 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SGCEO43556 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SGCEO43556 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SGCEO43556 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms