Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDLIM1O00151 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDLIM1O00151 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.41■□□□□ 0.22
PDLIM1O00151 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PDLIM1O00151 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDLIM1O00151 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDLIM1O00151 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDLIM1O00151 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDLIM1O00151 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDLIM1O00151 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDLIM1O00151 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.41■□□□□ 0.22
PDLIM1O00151 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDLIM1O00151 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.41■□□□□ 0.22
PDLIM1O00151 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDLIM1O00151 AC092053.1-201ENST00000605787 1936 ntBASIC16.41■□□□□ 0.22
PDLIM1O00151 AC126177.1-201ENST00000547829 2218 ntBASIC16.41■□□□□ 0.22
PDLIM1O00151 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.41■□□□□ 0.22
PDLIM1O00151 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDLIM1O00151 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
PDLIM1O00151 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM1O00151 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PDLIM1O00151 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM1O00151 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.4■□□□□ 0.22
PDLIM1O00151 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PDLIM1O00151 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.4■□□□□ 0.22
PDLIM1O00151 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM1O00151 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM1O00151 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
PDLIM1O00151 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM1O00151 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PDLIM1O00151 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.4■□□□□ 0.22
PDLIM1O00151 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM1O00151 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM1O00151 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM1O00151 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM1O00151 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.4■□□□□ 0.22
PDLIM1O00151 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
PDLIM1O00151 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM1O00151 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM1O00151 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM1O00151 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM1O00151 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PDLIM1O00151 TSPY5P-201ENST00000426936 936 ntBASIC16.4■□□□□ 0.22
PDLIM1O00151 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PDLIM1O00151 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM1O00151 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM1O00151 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.4■□□□□ 0.22
PDLIM1O00151 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM1O00151 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.4■□□□□ 0.22
PDLIM1O00151 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM1O00151 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM1O00151 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.4■□□□□ 0.22
PDLIM1O00151 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.4■□□□□ 0.22
PDLIM1O00151 AC104390.1-201ENST00000555663 520 ntBASIC16.4■□□□□ 0.22
PDLIM1O00151 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM1O00151 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.4■□□□□ 0.22
PDLIM1O00151 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM1O00151 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM1O00151 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
PDLIM1O00151 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM1O00151 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.4■□□□□ 0.22
PDLIM1O00151 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
PDLIM1O00151 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.4■□□□□ 0.22
PDLIM1O00151 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM1O00151 PAUPAR-201ENST00000630360 2965 ntBASIC16.4■□□□□ 0.22
PDLIM1O00151 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM1O00151 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PDLIM1O00151 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM1O00151 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM1O00151 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM1O00151 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM1O00151 AC092068.3-201ENST00000587894 2016 ntBASIC16.4■□□□□ 0.22
PDLIM1O00151 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.4■□□□□ 0.22
PDLIM1O00151 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
PDLIM1O00151 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.39■□□□□ 0.22
PDLIM1O00151 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDLIM1O00151 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDLIM1O00151 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PDLIM1O00151 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PDLIM1O00151 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.39■□□□□ 0.21
PDLIM1O00151 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDLIM1O00151 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDLIM1O00151 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PDLIM1O00151 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
PDLIM1O00151 FAM8A6P-201ENST00000407496 1135 ntBASIC16.39■□□□□ 0.21
PDLIM1O00151 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.39■□□□□ 0.21
PDLIM1O00151 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.39■□□□□ 0.21
PDLIM1O00151 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.39■□□□□ 0.21
PDLIM1O00151 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.39■□□□□ 0.21
PDLIM1O00151 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.39■□□□□ 0.21
PDLIM1O00151 AL049597.2-201ENST00000565575 961 ntBASIC16.39■□□□□ 0.21
PDLIM1O00151 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.39■□□□□ 0.21
PDLIM1O00151 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
PDLIM1O00151 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.39■□□□□ 0.21
PDLIM1O00151 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
PDLIM1O00151 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.39■□□□□ 0.21
PDLIM1O00151 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDLIM1O00151 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDLIM1O00151 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDLIM1O00151 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms