Protein–RNA interactions for Protein: Q9Y5G6

PCDHGA7, Protocadherin gamma-A7, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA7Q9Y5G6 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA7Q9Y5G6 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA7Q9Y5G6 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA7Q9Y5G6 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA7Q9Y5G6 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA7Q9Y5G6 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA7Q9Y5G6 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHGA7Q9Y5G6 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.06■□□□□ 0.32
PCDHGA7Q9Y5G6 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHGA7Q9Y5G6 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.06■□□□□ 0.32
PCDHGA7Q9Y5G6 KRT18P65-201ENST00000439811 1286 ntBASIC17.06■□□□□ 0.32
PCDHGA7Q9Y5G6 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.06■□□□□ 0.32
PCDHGA7Q9Y5G6 AC034105.1-201ENST00000563488 319 ntBASIC17.06■□□□□ 0.32
PCDHGA7Q9Y5G6 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.06■□□□□ 0.32
PCDHGA7Q9Y5G6 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA7Q9Y5G6 AC140113.2-201ENST00000604370 208 ntBASIC17.06■□□□□ 0.32
PCDHGA7Q9Y5G6 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PCDHGA7Q9Y5G6 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHGA7Q9Y5G6 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA7Q9Y5G6 AC008894.3-201ENST00000624324 3103 ntBASIC17.06■□□□□ 0.32
PCDHGA7Q9Y5G6 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA7Q9Y5G6 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA7Q9Y5G6 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PCDHGA7Q9Y5G6 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA7Q9Y5G6 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA7Q9Y5G6 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.05■□□□□ 0.32
PCDHGA7Q9Y5G6 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA7Q9Y5G6 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
PCDHGA7Q9Y5G6 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA7Q9Y5G6 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGA7Q9Y5G6 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PCDHGA7Q9Y5G6 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PCDHGA7Q9Y5G6 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA7Q9Y5G6 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGA7Q9Y5G6 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGA7Q9Y5G6 UPF3AP3-201ENST00000420996 769 ntBASIC17.05■□□□□ 0.32
PCDHGA7Q9Y5G6 AC098831.1-202ENST00000438821 336 ntBASIC17.05■□□□□ 0.32
PCDHGA7Q9Y5G6 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.05■□□□□ 0.32
PCDHGA7Q9Y5G6 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.05■□□□□ 0.32
PCDHGA7Q9Y5G6 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.05■□□□□ 0.32
PCDHGA7Q9Y5G6 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGA7Q9Y5G6 AL356488.2-201ENST00000602755 427 ntBASIC17.05■□□□□ 0.32
PCDHGA7Q9Y5G6 Z83851.2-201ENST00000609564 659 ntBASIC17.05■□□□□ 0.32
PCDHGA7Q9Y5G6 AL691403.2-201ENST00000618460 490 ntBASIC17.05■□□□□ 0.32
PCDHGA7Q9Y5G6 AC008735.5-201ENST00000623544 497 ntBASIC17.05■□□□□ 0.32
PCDHGA7Q9Y5G6 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGA7Q9Y5G6 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.05■□□□□ 0.32
PCDHGA7Q9Y5G6 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA7Q9Y5G6 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PCDHGA7Q9Y5G6 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA7Q9Y5G6 PCDHA14-201ENST00000506751 2298 ntBASIC17.05■□□□□ 0.32
PCDHGA7Q9Y5G6 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGA7Q9Y5G6 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA7Q9Y5G6 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA7Q9Y5G6 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA7Q9Y5G6 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA7Q9Y5G6 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA7Q9Y5G6 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGA7Q9Y5G6 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA7Q9Y5G6 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA7Q9Y5G6 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PCDHGA7Q9Y5G6 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA7Q9Y5G6 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PCDHGA7Q9Y5G6 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA7Q9Y5G6 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA7Q9Y5G6 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA7Q9Y5G6 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PCDHGA7Q9Y5G6 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA7Q9Y5G6 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PCDHGA7Q9Y5G6 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA7Q9Y5G6 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA7Q9Y5G6 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA7Q9Y5G6 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGA7Q9Y5G6 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA7Q9Y5G6 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA7Q9Y5G6 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA7Q9Y5G6 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA7Q9Y5G6 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA7Q9Y5G6 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA7Q9Y5G6 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGA7Q9Y5G6 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDHGA7Q9Y5G6 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGA7Q9Y5G6 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA7Q9Y5G6 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA7Q9Y5G6 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGA7Q9Y5G6 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGA7Q9Y5G6 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA7Q9Y5G6 AC092910.1-201ENST00000482027 1129 ntBASIC17.04■□□□□ 0.32
PCDHGA7Q9Y5G6 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGA7Q9Y5G6 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.04■□□□□ 0.32
PCDHGA7Q9Y5G6 AC025062.2-201ENST00000605477 670 ntBASIC17.04■□□□□ 0.32
PCDHGA7Q9Y5G6 LINC01451-201ENST00000623792 534 ntBASIC17.04■□□□□ 0.32
PCDHGA7Q9Y5G6 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA7Q9Y5G6 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.04■□□□□ 0.32
PCDHGA7Q9Y5G6 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDHGA7Q9Y5G6 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA7Q9Y5G6 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA7Q9Y5G6 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PCDHGA7Q9Y5G6 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA7Q9Y5G6 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms