Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA9Q9Y5G4 AP002414.1-201ENST00000391405 1147 ntBASIC16.08■□□□□ 0.16
PCDHGA9Q9Y5G4 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGA9Q9Y5G4 IGLL3P-201ENST00000412472 434 ntBASIC16.08■□□□□ 0.16
PCDHGA9Q9Y5G4 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.08■□□□□ 0.16
PCDHGA9Q9Y5G4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.08■□□□□ 0.16
PCDHGA9Q9Y5G4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.08■□□□□ 0.16
PCDHGA9Q9Y5G4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA9Q9Y5G4 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHGA9Q9Y5G4 AL078644.1-201ENST00000609881 752 ntBASIC16.08■□□□□ 0.16
PCDHGA9Q9Y5G4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA9Q9Y5G4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA9Q9Y5G4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
PCDHGA9Q9Y5G4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA9Q9Y5G4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGA9Q9Y5G4 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA9Q9Y5G4 FLJ13224-201ENST00000313737 1514 ntBASIC16.08■□□□□ 0.16
PCDHGA9Q9Y5G4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA9Q9Y5G4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA9Q9Y5G4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
PCDHGA9Q9Y5G4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA9Q9Y5G4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHGA9Q9Y5G4 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PCDHGA9Q9Y5G4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGA9Q9Y5G4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGA9Q9Y5G4 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA9Q9Y5G4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHGA9Q9Y5G4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA9Q9Y5G4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PCDHGA9Q9Y5G4 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGA9Q9Y5G4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA9Q9Y5G4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA9Q9Y5G4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA9Q9Y5G4 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA9Q9Y5G4 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.07■□□□□ 0.16
PCDHGA9Q9Y5G4 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGA9Q9Y5G4 STK19B-204ENST00000512515 211 ntBASIC16.07■□□□□ 0.16
PCDHGA9Q9Y5G4 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.07■□□□□ 0.16
PCDHGA9Q9Y5G4 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PCDHGA9Q9Y5G4 STK25P1-201ENST00000585406 838 ntBASIC16.07■□□□□ 0.16
PCDHGA9Q9Y5G4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.07■□□□□ 0.16
PCDHGA9Q9Y5G4 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.07■□□□□ 0.16
PCDHGA9Q9Y5G4 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA9Q9Y5G4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA9Q9Y5G4 BX276092.7-203ENST00000637198 1536 ntBASIC16.07■□□□□ 0.16
PCDHGA9Q9Y5G4 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA9Q9Y5G4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA9Q9Y5G4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PCDHGA9Q9Y5G4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA9Q9Y5G4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGA9Q9Y5G4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA9Q9Y5G4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA9Q9Y5G4 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA9Q9Y5G4 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA9Q9Y5G4 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHGA9Q9Y5G4 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.07■□□□□ 0.16
PCDHGA9Q9Y5G4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGA9Q9Y5G4 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA9Q9Y5G4 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA9Q9Y5G4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
PCDHGA9Q9Y5G4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA9Q9Y5G4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA9Q9Y5G4 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
PCDHGA9Q9Y5G4 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA9Q9Y5G4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGA9Q9Y5G4 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA9Q9Y5G4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA9Q9Y5G4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
PCDHGA9Q9Y5G4 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDHGA9Q9Y5G4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGA9Q9Y5G4 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGA9Q9Y5G4 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDHGA9Q9Y5G4 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA9Q9Y5G4 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA9Q9Y5G4 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PCDHGA9Q9Y5G4 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA9Q9Y5G4 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA9Q9Y5G4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
PCDHGA9Q9Y5G4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
PCDHGA9Q9Y5G4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
PCDHGA9Q9Y5G4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PCDHGA9Q9Y5G4 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PCDHGA9Q9Y5G4 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDHGA9Q9Y5G4 IGHV3-52-201ENST00000519770 353 ntBASIC16.06■□□□□ 0.16
PCDHGA9Q9Y5G4 AC109462.3-201ENST00000573934 613 ntBASIC16.06■□□□□ 0.16
PCDHGA9Q9Y5G4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDHGA9Q9Y5G4 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
PCDHGA9Q9Y5G4 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDHGA9Q9Y5G4 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.06■□□□□ 0.16
PCDHGA9Q9Y5G4 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
PCDHGA9Q9Y5G4 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA9Q9Y5G4 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PCDHGA9Q9Y5G4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA9Q9Y5G4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA9Q9Y5G4 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA9Q9Y5G4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PCDHGA9Q9Y5G4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGA9Q9Y5G4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA9Q9Y5G4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGA9Q9Y5G4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms