Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
MRPS28Q9Y2Q9 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
MRPS28Q9Y2Q9 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
MRPS28Q9Y2Q9 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
MRPS28Q9Y2Q9 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
MRPS28Q9Y2Q9 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MRPS28Q9Y2Q9 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MRPS28Q9Y2Q9 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.83□□□□□ -0.04
MRPS28Q9Y2Q9 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.83□□□□□ -0.04
MRPS28Q9Y2Q9 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MRPS28Q9Y2Q9 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
MRPS28Q9Y2Q9 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
MRPS28Q9Y2Q9 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
MRPS28Q9Y2Q9 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
MRPS28Q9Y2Q9 AC103564.2-201ENST00000432853 1299 ntBASIC14.83□□□□□ -0.04
MRPS28Q9Y2Q9 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC14.83□□□□□ -0.04
MRPS28Q9Y2Q9 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC14.83□□□□□ -0.04
MRPS28Q9Y2Q9 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC14.83□□□□□ -0.04
MRPS28Q9Y2Q9 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.83□□□□□ -0.04
MRPS28Q9Y2Q9 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.83□□□□□ -0.04
MRPS28Q9Y2Q9 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.83□□□□□ -0.04
MRPS28Q9Y2Q9 LINC01023-201ENST00000606054 436 ntBASIC14.83□□□□□ -0.04
MRPS28Q9Y2Q9 HYMAI.1-201ENST00000620949 238 ntBASIC14.83□□□□□ -0.04
MRPS28Q9Y2Q9 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC14.83□□□□□ -0.04
MRPS28Q9Y2Q9 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.83□□□□□ -0.04
MRPS28Q9Y2Q9 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MRPS28Q9Y2Q9 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
MRPS28Q9Y2Q9 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.83□□□□□ -0.04
MRPS28Q9Y2Q9 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MRPS28Q9Y2Q9 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
MRPS28Q9Y2Q9 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MRPS28Q9Y2Q9 AC079328.2-201ENST00000561241 3354 ntBASIC14.83□□□□□ -0.04
MRPS28Q9Y2Q9 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
MRPS28Q9Y2Q9 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.83□□□□□ -0.04
MRPS28Q9Y2Q9 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MRPS28Q9Y2Q9 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
MRPS28Q9Y2Q9 AC125634.1-201ENST00000438758 1403 ntBASIC14.83□□□□□ -0.04
MRPS28Q9Y2Q9 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MRPS28Q9Y2Q9 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.82□□□□□ -0.04
MRPS28Q9Y2Q9 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MRPS28Q9Y2Q9 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MRPS28Q9Y2Q9 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
MRPS28Q9Y2Q9 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MRPS28Q9Y2Q9 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MRPS28Q9Y2Q9 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.82□□□□□ -0.04
MRPS28Q9Y2Q9 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
MRPS28Q9Y2Q9 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
MRPS28Q9Y2Q9 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MRPS28Q9Y2Q9 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
MRPS28Q9Y2Q9 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MRPS28Q9Y2Q9 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MRPS28Q9Y2Q9 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MRPS28Q9Y2Q9 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MRPS28Q9Y2Q9 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
MRPS28Q9Y2Q9 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC14.82□□□□□ -0.04
MRPS28Q9Y2Q9 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
MRPS28Q9Y2Q9 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MRPS28Q9Y2Q9 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MRPS28Q9Y2Q9 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC14.82□□□□□ -0.04
MRPS28Q9Y2Q9 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MRPS28Q9Y2Q9 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.82□□□□□ -0.04
MRPS28Q9Y2Q9 ARL16-209ENST00000573715 763 ntTSL 3 BASIC14.82□□□□□ -0.04
MRPS28Q9Y2Q9 ARL16-211ENST00000576135 694 ntTSL 3 BASIC14.82□□□□□ -0.04
MRPS28Q9Y2Q9 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC14.82□□□□□ -0.04
MRPS28Q9Y2Q9 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.82□□□□□ -0.04
MRPS28Q9Y2Q9 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MRPS28Q9Y2Q9 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
MRPS28Q9Y2Q9 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MRPS28Q9Y2Q9 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
MRPS28Q9Y2Q9 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC14.82□□□□□ -0.04
MRPS28Q9Y2Q9 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.82□□□□□ -0.04
MRPS28Q9Y2Q9 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MRPS28Q9Y2Q9 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MRPS28Q9Y2Q9 AC073508.3-201ENST00000619697 1419 ntBASIC14.82□□□□□ -0.04
MRPS28Q9Y2Q9 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.82□□□□□ -0.04
MRPS28Q9Y2Q9 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MRPS28Q9Y2Q9 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.82□□□□□ -0.04
MRPS28Q9Y2Q9 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
MRPS28Q9Y2Q9 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.82□□□□□ -0.04
MRPS28Q9Y2Q9 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MRPS28Q9Y2Q9 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MRPS28Q9Y2Q9 AL049757.1-201ENST00000616842 1596 ntBASIC14.81□□□□□ -0.04
MRPS28Q9Y2Q9 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
MRPS28Q9Y2Q9 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
MRPS28Q9Y2Q9 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MRPS28Q9Y2Q9 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
MRPS28Q9Y2Q9 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
MRPS28Q9Y2Q9 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
MRPS28Q9Y2Q9 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
MRPS28Q9Y2Q9 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MRPS28Q9Y2Q9 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MRPS28Q9Y2Q9 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.81□□□□□ -0.04
MRPS28Q9Y2Q9 AL139384.1-201ENST00000612143 3047 ntBASIC14.81□□□□□ -0.04
MRPS28Q9Y2Q9 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MRPS28Q9Y2Q9 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
MRPS28Q9Y2Q9 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MRPS28Q9Y2Q9 AC005521.1-201ENST00000393351 872 ntBASIC14.81□□□□□ -0.04
MRPS28Q9Y2Q9 AK4P3-201ENST00000418260 669 ntBASIC14.81□□□□□ -0.04
MRPS28Q9Y2Q9 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MRPS28Q9Y2Q9 KRT18P57-201ENST00000443599 1254 ntBASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms