Protein–RNA interactions for Protein: Q9Y2K6

USP20, Ubiquitin carboxyl-terminal hydrolase 20, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP20Q9Y2K6 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
USP20Q9Y2K6 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.82■□□□□ 0.6
USP20Q9Y2K6 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
USP20Q9Y2K6 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP20Q9Y2K6 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP20Q9Y2K6 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP20Q9Y2K6 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
USP20Q9Y2K6 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
USP20Q9Y2K6 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
USP20Q9Y2K6 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
USP20Q9Y2K6 IGLL3P-201ENST00000412472 434 ntBASIC18.82■□□□□ 0.6
USP20Q9Y2K6 AC023274.1-201ENST00000418278 595 ntBASIC18.82■□□□□ 0.6
USP20Q9Y2K6 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.82■□□□□ 0.6
USP20Q9Y2K6 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.82■□□□□ 0.6
USP20Q9Y2K6 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.82■□□□□ 0.6
USP20Q9Y2K6 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.82■□□□□ 0.6
USP20Q9Y2K6 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.82■□□□□ 0.6
USP20Q9Y2K6 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.82■□□□□ 0.6
USP20Q9Y2K6 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.82■□□□□ 0.6
USP20Q9Y2K6 AC064836.3-201ENST00000607928 673 ntBASIC18.82■□□□□ 0.6
USP20Q9Y2K6 PGM5P2-202ENST00000637225 1043 ntBASIC18.82■□□□□ 0.6
USP20Q9Y2K6 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
USP20Q9Y2K6 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP20Q9Y2K6 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP20Q9Y2K6 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
USP20Q9Y2K6 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP20Q9Y2K6 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.82■□□□□ 0.6
USP20Q9Y2K6 AC093525.9-201ENST00000624961 1746 ntBASIC18.82■□□□□ 0.6
USP20Q9Y2K6 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP20Q9Y2K6 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
USP20Q9Y2K6 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
USP20Q9Y2K6 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
USP20Q9Y2K6 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP20Q9Y2K6 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
USP20Q9Y2K6 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
USP20Q9Y2K6 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
USP20Q9Y2K6 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP20Q9Y2K6 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP20Q9Y2K6 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
USP20Q9Y2K6 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
USP20Q9Y2K6 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP20Q9Y2K6 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.81■□□□□ 0.6
USP20Q9Y2K6 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP20Q9Y2K6 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP20Q9Y2K6 AP002414.1-201ENST00000391405 1147 ntBASIC18.81■□□□□ 0.6
USP20Q9Y2K6 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
USP20Q9Y2K6 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
USP20Q9Y2K6 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.81■□□□□ 0.6
USP20Q9Y2K6 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.81■□□□□ 0.6
USP20Q9Y2K6 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.81■□□□□ 0.6
USP20Q9Y2K6 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
USP20Q9Y2K6 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP20Q9Y2K6 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
USP20Q9Y2K6 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP20Q9Y2K6 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
USP20Q9Y2K6 AC138932.1-201ENST00000534164 6830 ntBASIC18.81■□□□□ 0.6
USP20Q9Y2K6 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP20Q9Y2K6 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
USP20Q9Y2K6 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP20Q9Y2K6 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP20Q9Y2K6 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
USP20Q9Y2K6 AC092053.1-201ENST00000605787 1936 ntBASIC18.8■□□□□ 0.6
USP20Q9Y2K6 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP20Q9Y2K6 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP20Q9Y2K6 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP20Q9Y2K6 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.8■□□□□ 0.6
USP20Q9Y2K6 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP20Q9Y2K6 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP20Q9Y2K6 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP20Q9Y2K6 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP20Q9Y2K6 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP20Q9Y2K6 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP20Q9Y2K6 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP20Q9Y2K6 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
USP20Q9Y2K6 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
USP20Q9Y2K6 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
USP20Q9Y2K6 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
USP20Q9Y2K6 VN2R19P-201ENST00000442399 1052 ntBASIC18.8■□□□□ 0.6
USP20Q9Y2K6 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.8■□□□□ 0.6
USP20Q9Y2K6 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.8■□□□□ 0.6
USP20Q9Y2K6 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
USP20Q9Y2K6 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
USP20Q9Y2K6 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.8■□□□□ 0.6
USP20Q9Y2K6 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
USP20Q9Y2K6 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
USP20Q9Y2K6 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP20Q9Y2K6 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.8■□□□□ 0.6
USP20Q9Y2K6 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP20Q9Y2K6 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
USP20Q9Y2K6 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
USP20Q9Y2K6 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
USP20Q9Y2K6 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP20Q9Y2K6 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP20Q9Y2K6 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP20Q9Y2K6 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USP20Q9Y2K6 PRORSD1P-202ENST00000563365 2154 ntBASIC18.79■□□□□ 0.6
USP20Q9Y2K6 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP20Q9Y2K6 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
USP20Q9Y2K6 PMS2P7-201ENST00000506558 1336 ntBASIC18.79■□□□□ 0.6
USP20Q9Y2K6 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms