Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZC3H4Q9UPT8 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
ZC3H4Q9UPT8 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.63■□□□□ 0.89
ZC3H4Q9UPT8 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZC3H4Q9UPT8 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZC3H4Q9UPT8 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZC3H4Q9UPT8 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZC3H4Q9UPT8 AL135999.2-201ENST00000622438 1686 ntBASIC20.63■□□□□ 0.89
ZC3H4Q9UPT8 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
ZC3H4Q9UPT8 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
ZC3H4Q9UPT8 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.62■□□□□ 0.89
ZC3H4Q9UPT8 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZC3H4Q9UPT8 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC20.62■□□□□ 0.89
ZC3H4Q9UPT8 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC20.62■□□□□ 0.89
ZC3H4Q9UPT8 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
ZC3H4Q9UPT8 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZC3H4Q9UPT8 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC20.62■□□□□ 0.89
ZC3H4Q9UPT8 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZC3H4Q9UPT8 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC20.62■□□□□ 0.89
ZC3H4Q9UPT8 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC20.62■□□□□ 0.89
ZC3H4Q9UPT8 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZC3H4Q9UPT8 AC018529.1-201ENST00000613063 361 ntBASIC20.62■□□□□ 0.89
ZC3H4Q9UPT8 SNX12-206ENST00000622259 661 ntTSL 5 BASIC20.62■□□□□ 0.89
ZC3H4Q9UPT8 AL391825.1-201ENST00000457671 1364 ntBASIC20.62■□□□□ 0.89
ZC3H4Q9UPT8 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZC3H4Q9UPT8 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZC3H4Q9UPT8 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
ZC3H4Q9UPT8 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZC3H4Q9UPT8 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZC3H4Q9UPT8 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.62■□□□□ 0.89
ZC3H4Q9UPT8 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZC3H4Q9UPT8 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZC3H4Q9UPT8 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZC3H4Q9UPT8 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZC3H4Q9UPT8 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
ZC3H4Q9UPT8 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZC3H4Q9UPT8 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
ZC3H4Q9UPT8 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZC3H4Q9UPT8 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZC3H4Q9UPT8 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZC3H4Q9UPT8 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZC3H4Q9UPT8 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZC3H4Q9UPT8 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC20.61■□□□□ 0.89
ZC3H4Q9UPT8 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.61■□□□□ 0.89
ZC3H4Q9UPT8 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
ZC3H4Q9UPT8 AC011495.1-201ENST00000498085 584 ntBASIC20.61■□□□□ 0.89
ZC3H4Q9UPT8 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZC3H4Q9UPT8 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC20.61■□□□□ 0.89
ZC3H4Q9UPT8 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
ZC3H4Q9UPT8 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC20.61■□□□□ 0.89
ZC3H4Q9UPT8 AC007541.1-201ENST00000570282 1469 ntBASIC20.61■□□□□ 0.89
ZC3H4Q9UPT8 ARL16-202ENST00000570561 768 ntTSL 2 BASIC20.61■□□□□ 0.89
ZC3H4Q9UPT8 AC012569.1-201ENST00000591191 1524 ntBASIC20.61■□□□□ 0.89
ZC3H4Q9UPT8 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC20.61■□□□□ 0.89
ZC3H4Q9UPT8 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZC3H4Q9UPT8 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZC3H4Q9UPT8 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZC3H4Q9UPT8 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZC3H4Q9UPT8 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZC3H4Q9UPT8 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZC3H4Q9UPT8 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.61■□□□□ 0.89
ZC3H4Q9UPT8 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H4Q9UPT8 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H4Q9UPT8 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H4Q9UPT8 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.6■□□□□ 0.89
ZC3H4Q9UPT8 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
ZC3H4Q9UPT8 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H4Q9UPT8 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC20.6■□□□□ 0.89
ZC3H4Q9UPT8 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H4Q9UPT8 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H4Q9UPT8 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H4Q9UPT8 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H4Q9UPT8 MIR658-201ENST00000385210 100 ntBASIC20.6■□□□□ 0.89
ZC3H4Q9UPT8 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
ZC3H4Q9UPT8 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC20.6■□□□□ 0.89
ZC3H4Q9UPT8 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
ZC3H4Q9UPT8 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC20.6■□□□□ 0.89
ZC3H4Q9UPT8 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC20.6■□□□□ 0.89
ZC3H4Q9UPT8 AC104794.3-201ENST00000566840 1248 ntBASIC20.6■□□□□ 0.89
ZC3H4Q9UPT8 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC20.6■□□□□ 0.89
ZC3H4Q9UPT8 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H4Q9UPT8 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC20.6■□□□□ 0.89
ZC3H4Q9UPT8 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H4Q9UPT8 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H4Q9UPT8 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H4Q9UPT8 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.6■□□□□ 0.89
ZC3H4Q9UPT8 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H4Q9UPT8 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H4Q9UPT8 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.6■□□□□ 0.89
ZC3H4Q9UPT8 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H4Q9UPT8 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H4Q9UPT8 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
ZC3H4Q9UPT8 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.6■□□□□ 0.89
ZC3H4Q9UPT8 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H4Q9UPT8 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H4Q9UPT8 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC20.59■□□□□ 0.89
ZC3H4Q9UPT8 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H4Q9UPT8 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H4Q9UPT8 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC20.59■□□□□ 0.89
ZC3H4Q9UPT8 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms