Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CXXC1Q9P0U4 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CXXC1Q9P0U4 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.25■□□□□ 0.51
CXXC1Q9P0U4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.25■□□□□ 0.51
CXXC1Q9P0U4 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CXXC1Q9P0U4 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CXXC1Q9P0U4 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.25■□□□□ 0.51
CXXC1Q9P0U4 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.25■□□□□ 0.51
CXXC1Q9P0U4 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC18.25■□□□□ 0.51
CXXC1Q9P0U4 AL132655.2-201ENST00000596276 594 ntBASIC18.25■□□□□ 0.51
CXXC1Q9P0U4 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
CXXC1Q9P0U4 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.25■□□□□ 0.51
CXXC1Q9P0U4 IGHV3-72-202ENST00000621503 303 ntBASIC18.25■□□□□ 0.51
CXXC1Q9P0U4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CXXC1Q9P0U4 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CXXC1Q9P0U4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CXXC1Q9P0U4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CXXC1Q9P0U4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
CXXC1Q9P0U4 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CXXC1Q9P0U4 AC007541.1-201ENST00000570282 1469 ntBASIC18.25■□□□□ 0.51
CXXC1Q9P0U4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CXXC1Q9P0U4 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.24■□□□□ 0.51
CXXC1Q9P0U4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.24■□□□□ 0.51
CXXC1Q9P0U4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CXXC1Q9P0U4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CXXC1Q9P0U4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CXXC1Q9P0U4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CXXC1Q9P0U4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
CXXC1Q9P0U4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CXXC1Q9P0U4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CXXC1Q9P0U4 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CXXC1Q9P0U4 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CXXC1Q9P0U4 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CXXC1Q9P0U4 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.24■□□□□ 0.51
CXXC1Q9P0U4 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CXXC1Q9P0U4 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.24■□□□□ 0.51
CXXC1Q9P0U4 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.24■□□□□ 0.51
CXXC1Q9P0U4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.24■□□□□ 0.51
CXXC1Q9P0U4 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.24■□□□□ 0.51
CXXC1Q9P0U4 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.24■□□□□ 0.51
CXXC1Q9P0U4 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.24■□□□□ 0.51
CXXC1Q9P0U4 AC007967.4-201ENST00000614700 386 ntBASIC18.24■□□□□ 0.51
CXXC1Q9P0U4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CXXC1Q9P0U4 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.24■□□□□ 0.51
CXXC1Q9P0U4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.24■□□□□ 0.51
CXXC1Q9P0U4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.24■□□□□ 0.51
CXXC1Q9P0U4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CXXC1Q9P0U4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CXXC1Q9P0U4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.23■□□□□ 0.51
CXXC1Q9P0U4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CXXC1Q9P0U4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CXXC1Q9P0U4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CXXC1Q9P0U4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CXXC1Q9P0U4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CXXC1Q9P0U4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CXXC1Q9P0U4 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CXXC1Q9P0U4 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
CXXC1Q9P0U4 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
CXXC1Q9P0U4 HCG4-201ENST00000418983 998 ntBASIC18.23■□□□□ 0.51
CXXC1Q9P0U4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.23■□□□□ 0.51
CXXC1Q9P0U4 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC18.23■□□□□ 0.51
CXXC1Q9P0U4 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.23■□□□□ 0.51
CXXC1Q9P0U4 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.23■□□□□ 0.51
CXXC1Q9P0U4 HLA-V-204ENST00000476601 1289 ntBASIC18.23■□□□□ 0.51
CXXC1Q9P0U4 GIMAP3P-201ENST00000495150 836 ntBASIC18.23■□□□□ 0.51
CXXC1Q9P0U4 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC18.23■□□□□ 0.51
CXXC1Q9P0U4 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.23■□□□□ 0.51
CXXC1Q9P0U4 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CXXC1Q9P0U4 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CXXC1Q9P0U4 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.23■□□□□ 0.51
CXXC1Q9P0U4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.23■□□□□ 0.51
CXXC1Q9P0U4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.23■□□□□ 0.51
CXXC1Q9P0U4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CXXC1Q9P0U4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CXXC1Q9P0U4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CXXC1Q9P0U4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CXXC1Q9P0U4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CXXC1Q9P0U4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.22■□□□□ 0.51
CXXC1Q9P0U4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CXXC1Q9P0U4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.22■□□□□ 0.51
CXXC1Q9P0U4 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.22■□□□□ 0.51
CXXC1Q9P0U4 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.22■□□□□ 0.51
CXXC1Q9P0U4 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.22■□□□□ 0.51
CXXC1Q9P0U4 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.22■□□□□ 0.51
CXXC1Q9P0U4 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.22■□□□□ 0.51
CXXC1Q9P0U4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CXXC1Q9P0U4 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CXXC1Q9P0U4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CXXC1Q9P0U4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.22■□□□□ 0.51
CXXC1Q9P0U4 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CXXC1Q9P0U4 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CXXC1Q9P0U4 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.22■□□□□ 0.51
CXXC1Q9P0U4 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CXXC1Q9P0U4 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.22■□□□□ 0.51
CXXC1Q9P0U4 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
CXXC1Q9P0U4 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.22■□□□□ 0.51
CXXC1Q9P0U4 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.22■□□□□ 0.51
CXXC1Q9P0U4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CXXC1Q9P0U4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CXXC1Q9P0U4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms