Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDLIM7Q9NR12 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDLIM7Q9NR12 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.12■□□□□ 0.65
PDLIM7Q9NR12 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.11■□□□□ 0.65
PDLIM7Q9NR12 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDLIM7Q9NR12 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDLIM7Q9NR12 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDLIM7Q9NR12 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.11■□□□□ 0.65
PDLIM7Q9NR12 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.11■□□□□ 0.65
PDLIM7Q9NR12 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PDLIM7Q9NR12 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.11■□□□□ 0.65
PDLIM7Q9NR12 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDLIM7Q9NR12 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.11■□□□□ 0.65
PDLIM7Q9NR12 AC005237.2-201ENST00000434368 219 ntBASIC19.11■□□□□ 0.65
PDLIM7Q9NR12 GAPDHP21-201ENST00000450301 1010 ntBASIC19.11■□□□□ 0.65
PDLIM7Q9NR12 AL513480.1-201ENST00000451731 511 ntBASIC19.11■□□□□ 0.65
PDLIM7Q9NR12 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PDLIM7Q9NR12 KRT8P48-201ENST00000515599 1220 ntBASIC19.11■□□□□ 0.65
PDLIM7Q9NR12 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.11■□□□□ 0.65
PDLIM7Q9NR12 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDLIM7Q9NR12 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.11■□□□□ 0.65
PDLIM7Q9NR12 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
PDLIM7Q9NR12 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDLIM7Q9NR12 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PDLIM7Q9NR12 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
PDLIM7Q9NR12 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.11■□□□□ 0.65
PDLIM7Q9NR12 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PDLIM7Q9NR12 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDLIM7Q9NR12 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDLIM7Q9NR12 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PDLIM7Q9NR12 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.1■□□□□ 0.65
PDLIM7Q9NR12 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDLIM7Q9NR12 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDLIM7Q9NR12 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDLIM7Q9NR12 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PDLIM7Q9NR12 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
PDLIM7Q9NR12 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PDLIM7Q9NR12 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.1■□□□□ 0.65
PDLIM7Q9NR12 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDLIM7Q9NR12 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PDLIM7Q9NR12 AC002056.1-201ENST00000395613 760 ntBASIC19.1■□□□□ 0.65
PDLIM7Q9NR12 TFAMP1-201ENST00000412727 736 ntBASIC19.1■□□□□ 0.65
PDLIM7Q9NR12 UGT1A2P-201ENST00000454886 866 ntBASIC19.1■□□□□ 0.65
PDLIM7Q9NR12 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PDLIM7Q9NR12 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.1■□□□□ 0.65
PDLIM7Q9NR12 AC099522.2-201ENST00000607001 744 ntBASIC19.1■□□□□ 0.65
PDLIM7Q9NR12 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDLIM7Q9NR12 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDLIM7Q9NR12 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PDLIM7Q9NR12 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDLIM7Q9NR12 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
PDLIM7Q9NR12 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDLIM7Q9NR12 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.1■□□□□ 0.65
PDLIM7Q9NR12 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDLIM7Q9NR12 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PDLIM7Q9NR12 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.1■□□□□ 0.65
PDLIM7Q9NR12 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PDLIM7Q9NR12 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDLIM7Q9NR12 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDLIM7Q9NR12 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDLIM7Q9NR12 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDLIM7Q9NR12 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDLIM7Q9NR12 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.09■□□□□ 0.65
PDLIM7Q9NR12 PP12613-201ENST00000424958 2230 ntBASIC19.09■□□□□ 0.65
PDLIM7Q9NR12 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDLIM7Q9NR12 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
PDLIM7Q9NR12 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PDLIM7Q9NR12 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDLIM7Q9NR12 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.09■□□□□ 0.65
PDLIM7Q9NR12 AC116353.5-201ENST00000638148 1699 ntBASIC19.09■□□□□ 0.65
PDLIM7Q9NR12 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDLIM7Q9NR12 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.09■□□□□ 0.65
PDLIM7Q9NR12 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDLIM7Q9NR12 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDLIM7Q9NR12 EDF1-203ENST00000371649 790 ntTSL 2 BASIC19.09■□□□□ 0.65
PDLIM7Q9NR12 MIR943-201ENST00000401286 94 ntBASIC19.09■□□□□ 0.65
PDLIM7Q9NR12 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.09■□□□□ 0.65
PDLIM7Q9NR12 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDLIM7Q9NR12 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.09■□□□□ 0.65
PDLIM7Q9NR12 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.09■□□□□ 0.65
PDLIM7Q9NR12 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDLIM7Q9NR12 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.09■□□□□ 0.65
PDLIM7Q9NR12 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.09■□□□□ 0.65
PDLIM7Q9NR12 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.09■□□□□ 0.65
PDLIM7Q9NR12 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.09■□□□□ 0.65
PDLIM7Q9NR12 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.09■□□□□ 0.65
PDLIM7Q9NR12 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
PDLIM7Q9NR12 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDLIM7Q9NR12 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.09■□□□□ 0.65
PDLIM7Q9NR12 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDLIM7Q9NR12 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
PDLIM7Q9NR12 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.09■□□□□ 0.65
PDLIM7Q9NR12 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.09■□□□□ 0.65
PDLIM7Q9NR12 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PDLIM7Q9NR12 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.09■□□□□ 0.65
PDLIM7Q9NR12 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDLIM7Q9NR12 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
PDLIM7Q9NR12 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.09■□□□□ 0.65
PDLIM7Q9NR12 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDLIM7Q9NR12 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms