Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.75■□□□□ 0.11
CHD8Q9HCK8 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CHD8Q9HCK8 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHD8Q9HCK8 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.75■□□□□ 0.11
CHD8Q9HCK8 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC15.75■□□□□ 0.11
CHD8Q9HCK8 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHD8Q9HCK8 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.75■□□□□ 0.11
CHD8Q9HCK8 NEU3-202ENST00000526068 431 ntTSL 2 BASIC15.75■□□□□ 0.11
CHD8Q9HCK8 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.75■□□□□ 0.11
CHD8Q9HCK8 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.75■□□□□ 0.11
CHD8Q9HCK8 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHD8Q9HCK8 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CHD8Q9HCK8 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHD8Q9HCK8 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CHD8Q9HCK8 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC15.74■□□□□ 0.11
CHD8Q9HCK8 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC15.74■□□□□ 0.11
CHD8Q9HCK8 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHD8Q9HCK8 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHD8Q9HCK8 RPL13AP20-201ENST00000459725 609 ntBASIC15.74■□□□□ 0.11
CHD8Q9HCK8 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.74■□□□□ 0.11
CHD8Q9HCK8 AL079307.3-201ENST00000556114 283 ntBASIC15.74■□□□□ 0.11
CHD8Q9HCK8 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.74■□□□□ 0.11
CHD8Q9HCK8 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.74■□□□□ 0.11
CHD8Q9HCK8 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.74■□□□□ 0.11
CHD8Q9HCK8 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHD8Q9HCK8 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHD8Q9HCK8 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CHD8Q9HCK8 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHD8Q9HCK8 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHD8Q9HCK8 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
CHD8Q9HCK8 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.74■□□□□ 0.11
CHD8Q9HCK8 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHD8Q9HCK8 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.74■□□□□ 0.11
CHD8Q9HCK8 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.74■□□□□ 0.11
CHD8Q9HCK8 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
CHD8Q9HCK8 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
CHD8Q9HCK8 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CHD8Q9HCK8 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC15.74■□□□□ 0.11
CHD8Q9HCK8 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CHD8Q9HCK8 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CHD8Q9HCK8 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHD8Q9HCK8 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CHD8Q9HCK8 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC15.73■□□□□ 0.11
CHD8Q9HCK8 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHD8Q9HCK8 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC15.73■□□□□ 0.11
CHD8Q9HCK8 AL135999.2-201ENST00000622438 1686 ntBASIC15.73■□□□□ 0.11
CHD8Q9HCK8 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHD8Q9HCK8 AC234644.1-201ENST00000406065 370 ntBASIC15.73■□□□□ 0.11
CHD8Q9HCK8 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.73■□□□□ 0.11
CHD8Q9HCK8 RN7SL618P-201ENST00000477850 296 ntBASIC15.73■□□□□ 0.11
CHD8Q9HCK8 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC15.73■□□□□ 0.11
CHD8Q9HCK8 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.73■□□□□ 0.11
CHD8Q9HCK8 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.73■□□□□ 0.11
CHD8Q9HCK8 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CHD8Q9HCK8 MIR3909-201ENST00000579518 119 ntBASIC15.73■□□□□ 0.11
CHD8Q9HCK8 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHD8Q9HCK8 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CHD8Q9HCK8 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.73■□□□□ 0.11
CHD8Q9HCK8 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
CHD8Q9HCK8 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC15.73■□□□□ 0.11
CHD8Q9HCK8 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CHD8Q9HCK8 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CHD8Q9HCK8 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CHD8Q9HCK8 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHD8Q9HCK8 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CHD8Q9HCK8 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CHD8Q9HCK8 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CHD8Q9HCK8 SLC25A47P1-201ENST00000531577 414 ntBASIC15.73■□□□□ 0.11
CHD8Q9HCK8 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.73■□□□□ 0.11
CHD8Q9HCK8 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CHD8Q9HCK8 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
CHD8Q9HCK8 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CHD8Q9HCK8 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.72■□□□□ 0.11
CHD8Q9HCK8 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHD8Q9HCK8 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHD8Q9HCK8 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHD8Q9HCK8 SLC25A24P2-201ENST00000415059 510 ntBASIC15.72■□□□□ 0.11
CHD8Q9HCK8 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.72■□□□□ 0.11
CHD8Q9HCK8 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.72■□□□□ 0.11
CHD8Q9HCK8 AC007551.1-201ENST00000457394 519 ntBASIC15.72■□□□□ 0.11
CHD8Q9HCK8 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.72■□□□□ 0.11
CHD8Q9HCK8 FAM86HP-204ENST00000513466 959 ntBASIC15.72■□□□□ 0.11
CHD8Q9HCK8 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.72■□□□□ 0.11
CHD8Q9HCK8 SRD5A3P1-201ENST00000603021 949 ntBASIC15.72■□□□□ 0.11
CHD8Q9HCK8 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.72■□□□□ 0.11
CHD8Q9HCK8 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.72■□□□□ 0.11
CHD8Q9HCK8 AL035456.1-201ENST00000456064 1369 ntBASIC15.72■□□□□ 0.11
CHD8Q9HCK8 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHD8Q9HCK8 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.72■□□□□ 0.11
CHD8Q9HCK8 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHD8Q9HCK8 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHD8Q9HCK8 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHD8Q9HCK8 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.72■□□□□ 0.11
CHD8Q9HCK8 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC15.72■□□□□ 0.11
CHD8Q9HCK8 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.72■□□□□ 0.11
CHD8Q9HCK8 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.72■□□□□ 0.11
CHD8Q9HCK8 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC15.72■□□□□ 0.11
CHD8Q9HCK8 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.72■□□□□ 0.11
CHD8Q9HCK8 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CHD8Q9HCK8 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms