Protein–RNA interactions for Protein: Q9BYG3

NIFK, MKI67 FHA domain-interacting nucleolar phosphoprotein, humanhuman

Known RBP Predictions only

Length 293 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKQ9BYG3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NIFKQ9BYG3 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
NIFKQ9BYG3 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NIFKQ9BYG3 HMGA1P7-201ENST00000406908 502 ntBASIC18.81■□□□□ 0.6
NIFKQ9BYG3 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
NIFKQ9BYG3 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.81■□□□□ 0.6
NIFKQ9BYG3 FAM58CP-201ENST00000435741 640 ntBASIC18.81■□□□□ 0.6
NIFKQ9BYG3 AC140658.5-201ENST00000438532 169 ntBASIC18.81■□□□□ 0.6
NIFKQ9BYG3 AP006288.1-201ENST00000446065 395 ntBASIC18.81■□□□□ 0.6
NIFKQ9BYG3 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.81■□□□□ 0.6
NIFKQ9BYG3 ACTG1P14-201ENST00000446382 1122 ntBASIC18.81■□□□□ 0.6
NIFKQ9BYG3 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
NIFKQ9BYG3 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.81■□□□□ 0.6
NIFKQ9BYG3 AC091167.2-201ENST00000579581 588 ntBASIC18.81■□□□□ 0.6
NIFKQ9BYG3 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.81■□□□□ 0.6
NIFKQ9BYG3 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NIFKQ9BYG3 AC092902.6-201ENST00000641783 218 ntBASIC18.81■□□□□ 0.6
NIFKQ9BYG3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NIFKQ9BYG3 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NIFKQ9BYG3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.81■□□□□ 0.6
NIFKQ9BYG3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NIFKQ9BYG3 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NIFKQ9BYG3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NIFKQ9BYG3 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
NIFKQ9BYG3 AL023806.1-201ENST00000603994 1649 ntBASIC18.81■□□□□ 0.6
NIFKQ9BYG3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
NIFKQ9BYG3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NIFKQ9BYG3 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NIFKQ9BYG3 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NIFKQ9BYG3 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.8■□□□□ 0.6
NIFKQ9BYG3 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NIFKQ9BYG3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NIFKQ9BYG3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NIFKQ9BYG3 SLC22A20-204ENST00000530038 1673 ntBASIC18.8■□□□□ 0.6
NIFKQ9BYG3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
NIFKQ9BYG3 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NIFKQ9BYG3 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.8■□□□□ 0.6
NIFKQ9BYG3 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.8■□□□□ 0.6
NIFKQ9BYG3 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.8■□□□□ 0.6
NIFKQ9BYG3 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.8■□□□□ 0.6
NIFKQ9BYG3 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.8■□□□□ 0.6
NIFKQ9BYG3 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.8■□□□□ 0.6
NIFKQ9BYG3 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NIFKQ9BYG3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.8■□□□□ 0.6
NIFKQ9BYG3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NIFKQ9BYG3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NIFKQ9BYG3 AC092053.1-201ENST00000605787 1936 ntBASIC18.8■□□□□ 0.6
NIFKQ9BYG3 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
NIFKQ9BYG3 AC012569.1-201ENST00000591191 1524 ntBASIC18.79■□□□□ 0.6
NIFKQ9BYG3 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
NIFKQ9BYG3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NIFKQ9BYG3 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NIFKQ9BYG3 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NIFKQ9BYG3 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NIFKQ9BYG3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.79■□□□□ 0.6
NIFKQ9BYG3 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.79■□□□□ 0.6
NIFKQ9BYG3 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NIFKQ9BYG3 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.79■□□□□ 0.6
NIFKQ9BYG3 HCG4-201ENST00000418983 998 ntBASIC18.79■□□□□ 0.6
NIFKQ9BYG3 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.79■□□□□ 0.6
NIFKQ9BYG3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.79■□□□□ 0.6
NIFKQ9BYG3 MPDU1-223ENST00000582151 728 ntBASIC18.79■□□□□ 0.6
NIFKQ9BYG3 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.79■□□□□ 0.6
NIFKQ9BYG3 AP001160.2-201ENST00000596071 487 ntBASIC18.79■□□□□ 0.6
NIFKQ9BYG3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NIFKQ9BYG3 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.79■□□□□ 0.6
NIFKQ9BYG3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NIFKQ9BYG3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NIFKQ9BYG3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.79■□□□□ 0.6
NIFKQ9BYG3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.79■□□□□ 0.6
NIFKQ9BYG3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NIFKQ9BYG3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NIFKQ9BYG3 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NIFKQ9BYG3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.79■□□□□ 0.6
NIFKQ9BYG3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NIFKQ9BYG3 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NIFKQ9BYG3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
NIFKQ9BYG3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NIFKQ9BYG3 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NIFKQ9BYG3 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.78■□□□□ 0.6
NIFKQ9BYG3 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
NIFKQ9BYG3 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NIFKQ9BYG3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.78■□□□□ 0.6
NIFKQ9BYG3 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NIFKQ9BYG3 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.78■□□□□ 0.6
NIFKQ9BYG3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NIFKQ9BYG3 CEND1P1-201ENST00000451006 455 ntBASIC18.78■□□□□ 0.6
NIFKQ9BYG3 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
NIFKQ9BYG3 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.78■□□□□ 0.6
NIFKQ9BYG3 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.78■□□□□ 0.6
NIFKQ9BYG3 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.78■□□□□ 0.6
NIFKQ9BYG3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NIFKQ9BYG3 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.78■□□□□ 0.6
NIFKQ9BYG3 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.78■□□□□ 0.6
NIFKQ9BYG3 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.78■□□□□ 0.6
NIFKQ9BYG3 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NIFKQ9BYG3 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
NIFKQ9BYG3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NIFKQ9BYG3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NIFKQ9BYG3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms