Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC3Q9BY71 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC3Q9BY71 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
LRRC3Q9BY71 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.87■□□□□ 0.45
LRRC3Q9BY71 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.87■□□□□ 0.45
LRRC3Q9BY71 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC3Q9BY71 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC3Q9BY71 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC3Q9BY71 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
LRRC3Q9BY71 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.86■□□□□ 0.45
LRRC3Q9BY71 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
LRRC3Q9BY71 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
LRRC3Q9BY71 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC3Q9BY71 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC3Q9BY71 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
LRRC3Q9BY71 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
LRRC3Q9BY71 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC3Q9BY71 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC3Q9BY71 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC3Q9BY71 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.86■□□□□ 0.45
LRRC3Q9BY71 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
LRRC3Q9BY71 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.86■□□□□ 0.45
LRRC3Q9BY71 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.86■□□□□ 0.45
LRRC3Q9BY71 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.86■□□□□ 0.45
LRRC3Q9BY71 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
LRRC3Q9BY71 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC3Q9BY71 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.86■□□□□ 0.45
LRRC3Q9BY71 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.86■□□□□ 0.45
LRRC3Q9BY71 AC022145.2-201ENST00000598203 171 ntBASIC17.86■□□□□ 0.45
LRRC3Q9BY71 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.86■□□□□ 0.45
LRRC3Q9BY71 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC3Q9BY71 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC3Q9BY71 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC3Q9BY71 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC3Q9BY71 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.86■□□□□ 0.45
LRRC3Q9BY71 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC3Q9BY71 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.86■□□□□ 0.45
LRRC3Q9BY71 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.86■□□□□ 0.45
LRRC3Q9BY71 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC3Q9BY71 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC3Q9BY71 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.86■□□□□ 0.45
LRRC3Q9BY71 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
LRRC3Q9BY71 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC3Q9BY71 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC3Q9BY71 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.85■□□□□ 0.45
LRRC3Q9BY71 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC3Q9BY71 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC3Q9BY71 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.85■□□□□ 0.45
LRRC3Q9BY71 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC3Q9BY71 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC3Q9BY71 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.85■□□□□ 0.45
LRRC3Q9BY71 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC3Q9BY71 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.85■□□□□ 0.45
LRRC3Q9BY71 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.85■□□□□ 0.45
LRRC3Q9BY71 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
LRRC3Q9BY71 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.85■□□□□ 0.45
LRRC3Q9BY71 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.85■□□□□ 0.45
LRRC3Q9BY71 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.85■□□□□ 0.45
LRRC3Q9BY71 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC3Q9BY71 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
LRRC3Q9BY71 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.85■□□□□ 0.45
LRRC3Q9BY71 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.85■□□□□ 0.45
LRRC3Q9BY71 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.85■□□□□ 0.45
LRRC3Q9BY71 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC3Q9BY71 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
LRRC3Q9BY71 AC099522.2-201ENST00000607001 744 ntBASIC17.85■□□□□ 0.45
LRRC3Q9BY71 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.85■□□□□ 0.45
LRRC3Q9BY71 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC3Q9BY71 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.85■□□□□ 0.45
LRRC3Q9BY71 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC3Q9BY71 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC3Q9BY71 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.84■□□□□ 0.45
LRRC3Q9BY71 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.84■□□□□ 0.45
LRRC3Q9BY71 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC3Q9BY71 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.84■□□□□ 0.45
LRRC3Q9BY71 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.84■□□□□ 0.45
LRRC3Q9BY71 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC3Q9BY71 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
LRRC3Q9BY71 TSEN15P1-201ENST00000423257 515 ntBASIC17.84■□□□□ 0.45
LRRC3Q9BY71 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.84■□□□□ 0.45
LRRC3Q9BY71 AC140658.5-201ENST00000438532 169 ntBASIC17.84■□□□□ 0.45
LRRC3Q9BY71 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
LRRC3Q9BY71 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC3Q9BY71 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.84■□□□□ 0.45
LRRC3Q9BY71 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.84■□□□□ 0.45
LRRC3Q9BY71 AC112191.1-201ENST00000523689 701 ntBASIC17.84■□□□□ 0.45
LRRC3Q9BY71 AC004835.2-201ENST00000603762 682 ntBASIC17.84■□□□□ 0.45
LRRC3Q9BY71 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.84■□□□□ 0.45
LRRC3Q9BY71 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.84■□□□□ 0.45
LRRC3Q9BY71 AL645728.2-201ENST00000641974 660 ntBASIC17.84■□□□□ 0.45
LRRC3Q9BY71 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.84■□□□□ 0.45
LRRC3Q9BY71 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
LRRC3Q9BY71 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC3Q9BY71 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC3Q9BY71 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC3Q9BY71 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC3Q9BY71 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC3Q9BY71 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC3Q9BY71 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC3Q9BY71 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms