Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
ABCA3Q99758 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
ABCA3Q99758 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
ABCA3Q99758 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ABCA3Q99758 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ABCA3Q99758 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ABCA3Q99758 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
ABCA3Q99758 NAA38-206ENST00000576384 424 ntTSL 2 BASIC22.5■■□□□ 1.19
ABCA3Q99758 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ABCA3Q99758 SIGLEC29P-201ENST00000599873 1114 ntBASIC22.5■■□□□ 1.19
ABCA3Q99758 CHCHD2P3-201ENST00000603038 451 ntBASIC22.5■■□□□ 1.19
ABCA3Q99758 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ABCA3Q99758 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
ABCA3Q99758 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
ABCA3Q99758 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC22.5■■□□□ 1.19
ABCA3Q99758 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ABCA3Q99758 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
ABCA3Q99758 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC22.49■■□□□ 1.19
ABCA3Q99758 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ABCA3Q99758 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
ABCA3Q99758 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC22.49■■□□□ 1.19
ABCA3Q99758 AL353779.1-201ENST00000434793 351 ntBASIC22.49■■□□□ 1.19
ABCA3Q99758 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC22.49■■□□□ 1.19
ABCA3Q99758 AC245100.3-201ENST00000441281 285 ntBASIC22.49■■□□□ 1.19
ABCA3Q99758 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC22.49■■□□□ 1.19
ABCA3Q99758 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
ABCA3Q99758 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC22.49■■□□□ 1.19
ABCA3Q99758 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC22.49■■□□□ 1.19
ABCA3Q99758 AL079307.3-201ENST00000556114 283 ntBASIC22.49■■□□□ 1.19
ABCA3Q99758 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
ABCA3Q99758 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ABCA3Q99758 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
ABCA3Q99758 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC22.49■■□□□ 1.19
ABCA3Q99758 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ABCA3Q99758 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC22.49■■□□□ 1.19
ABCA3Q99758 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ABCA3Q99758 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
ABCA3Q99758 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
ABCA3Q99758 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC22.49■■□□□ 1.19
ABCA3Q99758 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
ABCA3Q99758 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
ABCA3Q99758 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ABCA3Q99758 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC22.48■■□□□ 1.19
ABCA3Q99758 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC22.48■■□□□ 1.19
ABCA3Q99758 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC22.48■■□□□ 1.19
ABCA3Q99758 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
ABCA3Q99758 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
ABCA3Q99758 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC22.48■■□□□ 1.19
ABCA3Q99758 RN7SL828P-201ENST00000607615 303 ntBASIC22.48■■□□□ 1.19
ABCA3Q99758 AC021097.1-201ENST00000607902 574 ntBASIC22.48■■□□□ 1.19
ABCA3Q99758 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ABCA3Q99758 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC22.48■■□□□ 1.19
ABCA3Q99758 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC22.48■■□□□ 1.19
ABCA3Q99758 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ABCA3Q99758 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
ABCA3Q99758 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
ABCA3Q99758 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC22.48■■□□□ 1.19
ABCA3Q99758 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC22.48■■□□□ 1.19
ABCA3Q99758 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ABCA3Q99758 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC22.48■■□□□ 1.19
ABCA3Q99758 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC22.48■■□□□ 1.19
ABCA3Q99758 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ABCA3Q99758 AC092658.1-201ENST00000505836 891 ntBASIC22.48■■□□□ 1.19
ABCA3Q99758 AC093004.1-201ENST00000508850 424 ntBASIC22.48■■□□□ 1.19
ABCA3Q99758 KRT17P8-201ENST00000540749 863 ntBASIC22.48■■□□□ 1.19
ABCA3Q99758 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC22.48■■□□□ 1.19
ABCA3Q99758 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC22.48■■□□□ 1.19
ABCA3Q99758 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC22.48■■□□□ 1.19
ABCA3Q99758 SPTSSB-204ENST00000617024 1292 ntBASIC22.48■■□□□ 1.19
ABCA3Q99758 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
ABCA3Q99758 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
ABCA3Q99758 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC22.47■■□□□ 1.19
ABCA3Q99758 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC22.47■■□□□ 1.19
ABCA3Q99758 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
ABCA3Q99758 AC007541.1-201ENST00000570282 1469 ntBASIC22.47■■□□□ 1.19
ABCA3Q99758 ANKRD19P-201ENST00000338192 862 ntBASIC22.47■■□□□ 1.19
ABCA3Q99758 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
ABCA3Q99758 KRT18P34-201ENST00000488218 1270 ntBASIC22.47■■□□□ 1.19
ABCA3Q99758 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
ABCA3Q99758 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
ABCA3Q99758 AC008735.3-201ENST00000596646 500 ntBASIC22.47■■□□□ 1.19
ABCA3Q99758 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC22.47■■□□□ 1.19
ABCA3Q99758 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
ABCA3Q99758 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC22.47■■□□□ 1.19
ABCA3Q99758 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
ABCA3Q99758 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
ABCA3Q99758 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC22.47■■□□□ 1.19
ABCA3Q99758 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC22.47■■□□□ 1.19
ABCA3Q99758 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
ABCA3Q99758 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
ABCA3Q99758 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC22.46■■□□□ 1.19
ABCA3Q99758 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC22.46■■□□□ 1.19
ABCA3Q99758 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC22.46■■□□□ 1.19
ABCA3Q99758 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
ABCA3Q99758 GNAQP1-201ENST00000444815 1067 ntBASIC22.46■■□□□ 1.19
ABCA3Q99758 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
ABCA3Q99758 AL589739.1-201ENST00000607720 493 ntBASIC22.46■■□□□ 1.19
ABCA3Q99758 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC22.46■■□□□ 1.19
ABCA3Q99758 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
ABCA3Q99758 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms